KEGG   Meleagris gallopavo (turkey): 100550592
Entry
100550592         CDS       T01523                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
mgp  Meleagris gallopavo (turkey)
Pathway
mgp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mgp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100550592 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mgp03400]
    100550592 (TDP1)
DNA repair and recombination proteins [BR:mgp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     100550592 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 100550592
NCBI-ProteinID: XP_085081602
LinkDB
Position
5:43429673..43466996
AA seq 603 aa
MLQEGAHGRWTVSSSEDSTEENSDNEKPSTSSLLSAPRSETSAPQYPCSEARRAAHKRKA
SPLKFIDTRLPAQTPPAEKQRPGQEGLGWCLSSSDEEPEDREKHASKETLKEEKCDEQPR
SHCKDEHSKNVKAEDYNEAPGEPQDTWDLLSGGNPFGFFLTKVRGIEQSYNSGALHIKDI
LSPLFGTLVSSAQFNYCIDVAWLVRQYPQEYRKKPLLIVHGEKRESKAELLAQARPFENI
SFCQAKLDIAFGTHHTKMMLLLYEEGFRVVIHTSNLIAEDWHQKTQGIWLSPLYPRLPQG
SSDSAGESETNFKSDLISYLMAYSSPVLKEWIDLIREHDLSETRVYLLGSTPGRYQGIDK
EKWGHLRLRKLLKEHASSIPAQESWPVVGQFSSIGSLGADESKWLRSEFQESLVAAGSGV
AALLKCDVPIHLVYPTVNNVRQSLEGYPAGGSLPYSIQTAQKQLWLHSYFHKWSAEVSGR
SHAMPHIKTYMRPSRDFQKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLFLPSA
FGLDKGYFHVKGKMLSEGKDSATSFPVPFDLPPEQYGSKDQPWIWNIPYTSAPDTHGNMW
VPS
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgcttcaggaaggtgcccatggacggtggactgtgtccagcagtgaggacagcactgaa
gagaattctgacaatgaaaagccctcgacatcctcgctgctgagtgccccacgcagtgaa
acgagtgcgccgcagtacccctgctctgaggccaggagggctgctcacaagaggaaggct
tctccactgaagttcattgacacacgtctccctgcacaaacacctcctgcagaaaagcag
aggcccggccaggagggcttgggatggtgcctttctagtagtgatgaagagcctgaagac
cgggagaagcacgccagcaaggaaacactgaaagaggaaaagtgtgatgagcaacctcgg
agtcattgcaaagatgaacattcaaagaatgtgaaagcagaggactataacgaagcacct
ggtgaaccccaagatacctgggatttgctgagtggagggaatccctttgggttttttctc
accaaagttaggggaattgagcagagctataattctggagccctgcacatcaaagatatt
ttgtctcctctttttgggacccttgtatcttctgctcagtttaactactgtatagatgtg
gcatggcttgtaaggcagtatccacaggaatacaggaagaaaccattgctgatagttcat
ggtgaaaagagagaatccaaagctgaacttcttgcacaagcacgcccttttgagaacatt
agcttctgtcaggccaagctggatattgcatttggaactcaccatacgaaaatgatgttg
ttactatatgaagaaggttttcgagttgtgatacatacatccaatcttattgctgaagac
tggcaccagaaaactcagggaatatggctaagccctttatatccaaggctacctcaggga
tcatctgattctgctggcgaatctgaaactaattttaaatctgacctaataagttacttg
atggcttacagttctcctgtgctcaaggaatggatagatctgattcgagaacatgactta
tcagagacaagagtatatctgcttggttctacccctgggcgatatcaaggtatcgataaa
gagaagtggggtcatcttaggctcagaaagcttttgaaagagcatgcttcatcaatacca
gcacaggagtcttggcctgttgtaggacagttctcaagcattggttccctgggagcagat
gagtccaaatggctgcgctcagaattccaggagagcctggtggctgcaggcagtggtgtg
gcagctcttcttaaatgtgatgttccgattcatttggtttatcctactgtgaacaatgtg
aggcaaagtctggaaggctatcctgctggtggttcccttccatacagcatacagacagca
cagaaacagctgtggttacattcctattttcacaaatggtcagcagaagtctcaggtcga
agtcatgccatgcctcacatcaagacatacatgagaccttctcgtgactttcagaagatt
gcatggtttttagttacaagtgccaatctatctaaagcagcatggggagctctggagaaa
aatggcacccaattgatgatccgttcatatgaacttggagtccttttcttgccttcagca
tttggattggacaaaggttacttccacgtgaaagggaaaatgctttcagaaggtaaagat
tcagcaacatcttttcctgtaccatttgatctgcctccagaacaatatggaagcaaagat
caaccgtggatttggaatattccttacactagtgcccctgatacacatggaaatatgtgg
gttccatcgtga

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