Meleagris gallopavo (turkey): 100550696
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Entry
100550696 CDS
T01523
Symbol
RFC1
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03030
DNA replication
mgp03410
Base excision repair
mgp03420
Nucleotide excision repair
mgp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100550696 (RFC1)
03410 Base excision repair
100550696 (RFC1)
03420 Nucleotide excision repair
100550696 (RFC1)
03430 Mismatch repair
100550696 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgp03032
]
100550696 (RFC1)
03400 DNA repair and recombination proteins [BR:
mgp03400
]
100550696 (RFC1)
DNA replication proteins [BR:
mgp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100550696 (RFC1)
DNA repair and recombination proteins [BR:
mgp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100550696 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
Rad17
AAA_14
AAA_22
BRCT_2
RuvB_N
AAA_30
AAA_5
AAA_17
RNA_helicase
AAA_18
AAA_16
AAA_33
AAA_7
nSTAND3
AAA_19
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
100550696
NCBI-ProteinID:
XP_019470443
Ensembl:
ENSMGAG00000012310
LinkDB
All DBs
Position
4:48959352..48990409
Genome browser
AA seq
1156 aa
AA seq
DB search
MAAAPGGGDTKEDIRKFFGVVPPGKQQGCQAVKKSEKXKNGEGESSGKKRGKETKVKSSP
SEDVPKQKQAYKKKRIIYDSDSEEEVQSVXKTKKTSEKKAATPKLGKVLKQHPVVYVSET
DEEDDFVNKRISLKPKENGASAISCPGTAAVKKADVKAQAKAKPLSPVKLTPTSALDYFG
TRSVQRSEKKLVASKRKEPSQSGDSTLDDEAIARQLQLEEDSELERQLHEDEEFARTLAM
LDETPQKKKARRDSGEQTVLSIKSSPNATGRYKQSQRAKATNSAGEVKEQTKSENSKEPN
LHPSVGEIARALTEKTLPLKPTSKLVALKQKEETTKKQSGTQNLLSKEKNAMGKEEKRTP
KKEKISPKKAESISPEDSEKRRSNYQAYRSFLNREGPKALGSKEIPQGAENCLEGLTFVI
TGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDCGQSKCEKASALGTKIIDEDG
LFDLVRTMPGKKSKYELAAETEAKKAESRHKKTPQKTESGKRNFSPLKREADRKKSNCTP
EKGGTFKSVKKEATAIRKLKDFEHQTVQKKEAPKSKGTLVSESSENKTETLLWVDKYKPA
SLKAIIGQQGEQSCANKLLRWLRSWYRNTSEDGQAKTNKSGGKDDGSSFKAALLSGPPGV
GKTTTASLVCKELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKGFCSGTSSSVSGKHV
LIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPR
LEQIKGAMMSIAFKEGLKIPPPAMNEIILAANQDIRQVLHNLNMWCAKDKSLTYDEAKTD
AGRAKKDIKLGPFDVVRKVFAAGEEASRMSLIDKSDLFFHDYSLAPLFVQENYVHVKPAA
AGGDLKKHLMLLSRAADSICDGDLVDKQIRTKQNWNLLPTQAIYSSVLPGELMRGYMSQF
PVFPSWLGKFSSTGKHERIIQELAMHMSLRTQACKRTVNMEYLSHLRDALIQPLKAFGAD
GVQDAIAFMDSYCLMKEDIENIMEISMWGGKPSPFSKLDPKVKAAFTRAYNKEVHLTPYS
LHSVKLSRQQSGSMGTSELNGELNVEEIQSEEEEQDTVESDAMIKQKKVKSSKLPKREKN
EETTKKEGKRKEKTRH
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcccctgggggtggtgatactaaggaggatatccggaaattctttggcgtt
gtgcctcctggaaagcagcaggggtgccaggctgtgaaaaagagcgagaagnataaaaac
ggggaaggagaatcaagtgggaagaagaggggaaaggaaacaaaggtgaagagttcaccc
agtgaagatgttcccaaacaaaagcaggcatacaagaaaaaaagaataatctatgattca
gattcagaagaggaggtgcagtctgtgnaaaaaaccaagaagacatcagagaagaaagca
gcgactccaaaacttggtaaagttctaaagcagcatcctgttgtctatgtttcagagaca
gatgaagaggatgactttgtcaacaagagaatttccctgaaaccaaaggagaatggggca
tcagcaatcagttgtccaggaacagcagcagtgaaaaaagcagatgtaaaggcacaggct
aaagccaaaccattatctccggtgaaactgactcccacctcagctcttgattactttggg
acaagaagtgtccagcgatcagaaaagaaactggtagcgagtaaaaggaaggaaccttca
caaagcggagacagcacactagatgatgaggccattgctaggcaactgcagcttgaagaa
gattcggagctggagagacagctgcatgaagatgaagaatttgctagaactttggcaatg
ttggatgaaaccccacagaagaaaaaggctcggagagattcgggggagcaaacggtgctg
agcatcaagagcagtcctaatgcgacgggaagatacaaacaatcccaaagagcgaaagca
acaaactcggcaggtgaagtaaaagaacaaactaaatctgaaaattcaaaagagcctaat
ttacatccatctgttggtgaaatagcaagggcactgacggagaaaaccttgcctttgaaa
cctacctcaaagcttgtggctctaaaacagaaggaggagactactaaaaagcaaagtggc
actcaaaacttactatcaaaagaaaaaaatgctatggggaaagaagagaaaagaacaccc
aagaaggagaaaatttctcccaagaaggctgagtctataagtcctgaggactctgaaaag
agacgaagcaactatcaagcctaccgaagcttcctcaatcgcgagggtccgaaagctctg
ggttccaaagagattcctcaaggagctgaaaactgcttggaaggcctgacgttcgtaatt
acaggagttctggagtccattgaaagagatgaggccaagtctctgattgaacgatacgga
ggaaaagtaactggcaatgtcagcaagaagacaaactatctggttatgggacgagactgc
ggacagtctaaatgtgaaaaggcatcagctttagggacaaaaattattgatgaggatggc
ctatttgatcttgttcgaacgatgccaggcaagaagtccaagtatgagctggcagctgaa
acagaggcaaagaaggcagagtcaagacataaaaagacaccacagaaaactgagtctggc
aaaaggaattttagtcctctcaaaagggaagctgataggaagaaaagtaattgtacacct
gaaaagggaggtaccttcaaatctgtcaagaaagaagctactgccattcgaaagcttaag
gactttgaacatcaaactgtgcagaagaaagaagcccccaaatctaaggggaccttggtt
tctgagagcagtgaaaataaaacagagacattactatgggtagataaatacaagcctgca
tctcttaaggcgataattggacagcagggtgagcagagctgtgccaataaactcctccga
tggcttcgaagctggtacaggaatacctcagaagatggacaagcaaagaccaacaaatct
ggaggcaaagatgatggttctagttttaaagcagcattgctctctggtccacctggagtt
ggtaaaactaccacagcttctttagtttgtaaggaactggggtacagctatgtggagctg
aatgccagtgacactcgaagtaagaacagtctaaaggaagtagttgctgaatcactgaac
aacaccagcatcaaaggcttctgttctggcacatcctcatcagttagcgggaaacatgta
ttgatcatggatgaagtggatggtatggcaggcaatgaagacagaggagggattcaggaa
ctgattggtttgattaaacacacaaagatacccatcatctgtatgtgtaatgaccgaaac
catccgaaaattcgttccttggtccactattgttttgatcttcgttttcagagacctcgt
ctagaacagattaagggtgccatgatgtctattgcatttaaagaaggtttgaaaattcca
ccacctgctatgaacgagataatcctggcagcaaatcaagacatcagacaggttttgcat
aatctcaatatgtggtgtgcaaaagataaatcattgacttacgatgaggccaaaacagac
gctggcagagccaaaaaggatatcaaactgggcccttttgatgttgtccggaaagttttt
gctgctggagaggaggcttctcgtatgtctcttatagacaaatcagatctcttcttccat
gactattccctagcacctctctttgtccaagagaactatgtgcatgtgaaacctgctgct
gctggaggagatttgaagaaacacttgatgctcttgagtagagctgctgatagtatatgt
gatggtgatctggtggacaaacagattcgtaccaagcaaaactggaaccttctaccgaca
caggctatttattcgagtgttcttcctggggagctgatgagaggttacatgtcccagttt
cctgtctttcccagctggctggggaaattttcatccacgggcaaacacgaacgtatcatc
caagaactggcaatgcacatgagtctgagaacccaagcatgcaagaggacagtaaatatg
gaatatttgtcacatctgcgtgatgcactcatccagccactgaaagcctttggagcagat
ggggtacaagatgctatagcattcatggactcttactgcctgatgaaagaagacattgaa
aacataatggaaataagcatgtggggaggtaaacccagtcctttttcaaagctggatccc
aaggtcaaggcagcttttacacgtgcctacaacaaagaggtgcatctgactccatattcc
cttcattctgtgaagttgtcaagacagcagtcaggatccatggggacctctgaactgaac
ggagaactgaatgtggaagagatccaatctgaggaggaggagcaagatactgttgaaagt
gatgcaatgatcaagcaaaaaaaggtgaagtcttccaagctgccaaaaagagagaaaaat
gaagaaacaacaaaaaaagaaggtaaaagaaaagagaaaacaagacattaa
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integrated database retrieval system
