Meleagris gallopavo (turkey): 104913182
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Entry
104913182 CDS
T01523
Symbol
COL7A1
Name
(RefSeq) collagen alpha-1(VII) chain isoform X5
KO
K16628
collagen type VII alpha
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104913182 (COL7A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
fn3
VWA_2
Kunitz_BPTI
Pur_ac_phosph_N
Interfer-bind
DUF1194
YjeF_N
Fndc10
Motif
Other DBs
NCBI-GeneID:
104913182
NCBI-ProteinID:
XP_019475652
LinkDB
All DBs
Position
14:8705696..8729115
Genome browser
AA seq
2941 aa
AA seq
DB search
MSGRLLLLALLLAPQAAAAQKRSQAVCENVLEADIAFLVDGSSSIGRNNFRAIRTFVEDL
VSPFVHVVGQKAVRFAVVQYSDDPRVEFGFSQHTNGTGIQRAIQQLSYKGGNTRTGAGLR
FVSDNFFGPTQLRPGVPKICILITDGKSQDDAEQPALRLKSLGIKVFAVGIKNADRQELI
RVASLPTESFFFYVGDFKLLGTLVPLMTRRVCTSSGGTLRTPDGQGHAGPSNLEILEHGP
DVLRIRWSPASGPVTGYRVQRVPLTGLGQPLAAERQEVSVGPRETSTVLRGLRAGTEYLV
TVIAQYANSVSESVSARARTQSRGGVQHFHVAEAGPTFLRLSWQPGPEPPQGYILSYAMP
GMPQSEERSLGAGVLSATLSNLRPNTEYVVTLQARYAQQPAATASLTARTQPGTEQTLRT
NILSPTSIHVLWTAIREARGYRLEWKRATGLETPRTVSLPSSASTYQLTGLQPGTEYRIT
LYTLYEGGEVATPVTTFQTGVDVPVGVVSDLRLIEDLGRRVRLGWTGVPGATEYKVTVRN
TQDGTERTRRIPGTQTALELGDLREGVTYLVRISALVGSQEGSAAALSIHVKFPAVGSVS
ELRVTESDPNQLRVTWRGLSGAGGYRLTWRASDGQEQSRFLPANPTAYTIEGLRAGTVYA
IGVTAIVDGREGPPVTTMGRTAAEQVGTVSRLEVQSSRSNVARVTWVGVPGATAYRVVWS
RRDGGSEKSQHVPGHISSFDIPDLEGGVSYTVKVTALIGNHEGNPVSIIVTTPEAAPVLP
VSNLQVMEASEHRLRLAWVPVSGSSGYRLVWRPAEGGPQRSQQLPATASSYDLGGLEPGR
RYHISITSMVGSRESAPVAVTSATAASLSHATSLRVTEVQRDSVTLSWTPVPGASEYVLS
WTPPAAGGEARRVVPGTASSLQVPGLRLGQRYTFTIRPLLGSTPGAESSVSERPVCRDAR
GDIVFLVHGTRDSSAGADTVRTLLSNTVTAMGRLGPDGTQVGLATYSYRSLPWLLLNRSS
ELPAVLEQIRTMRYEEPSGNAIGAAITFARTYLLSPGAGRRPGVPAVLVVLADGPSGDDA
ITAARDAKAAGVRVLAVGLEGADQEQLRRMVSGEDPRFVFRNRGSLSELEGELTDDLCTI
ISTRPEPEPKPCTVQCPKGEKGDPGVAGPQGRVGQPGPPGEPGRHGLPGPPGPVGPRGPP
GESVEQLGKKGDRGFPGADGRPGLPGPPGNPGSPGQPGNQGIPGPRGDPGPRGTAGHPGL
KGEKGEPGEPRVITDGGQGLPGRKGEPGTPGSTGPPGNPGPRGPFGDPGPPGPLGPMGPP
GPPGDSVKGEKGDRGERGPPGLVDGAVPQGEPGPPGPPGEPGPRGLAGTPGPKGEKGDGE
EGFPGPPGRPGEPGDRGPRGPPGEQGRKGERGAPGELGEMGQKGDRGAPGPEGEKGEIGA
PGRPGPPGREGVPGPAGPRGEKGDVGAPGEPGQPAPSVTSVRGEKGDRGFPGPEGPPGPK
GDVGERGARGVPGLSIPGPTGPKGEQGERGITGLTGRSGPKGDAGEPGEKGEPGRVGAPG
QPGQRGKEGERGEKGDEGAPGEAGVPGKPGDRGPRGLPGYRGPPGEKGDLGDPGPEGRNG
IPGAPGIKGDRGEPGPPGPPGRAVDVGLGGAGEKGEKGDAGDPGEDGAKGAKGEIGPPGL
PGLSGIEGPRGPPGARGDPGDRGLPGEKGERGPPGLDGRNGLEGKPGPPGPTGLRGDPGK
QGDPGRDGLPGLRGEQGPPGTIGPLGPPGIPGKPGDDGKPGLNGKNGEDGTPGEDGRKGD
KGDAGAPGRDGHSGAKGEQGDRGTPGLPGPPGVPGVPGQVGPPGQGSPGLRGITGPKGDP
GEPGPRGEPGRPGASGDPGTAVNIERSLEALGIKISSLKELTGAYDGSSDSFLPVSERLR
GQKGSRGDPGERGPPGREGSLGFPGERGPKGDKGDQGAPGPQGPAGRAVGERGLEGPPGQ
PGEPGKPGIPGVPGRAGELGEAGRPGEKGDRGEKGDRGEQGRDGLPGPPGPPGLKADTME
GSLMGFPGERGPPGLKGVKGEPGAEGERGPKGDKGEGGSRGERGEPGEKGRDGSPGLPGE
RGLAGPEGKPGLPGFPGVLGRPGNQGEPGPPGPPGAAGPPGSQGPSGMKGNPGEPGASIR
GLPGPQGSMGLPGPPGPPGLVGPPGAPGLPGQVGESGKPGVPGRDGVPGKDGEPGMPGKL
GVPGPSGPTGPKGEPGDAGAPGQGIAGPPGAKGEKGEPALLEGVLLGEPGSKGARGLPGP
KGEKGEPGGAGEPGDPGEDGAKGSSGVKGEKGTPGVGVRGPPGQDGPPGLKGDIGLPGPP
GPPGLVGIAGAPGQPGLRGDSGQPGPPGAPGERGAIGFPGRDGAAGPPGPQGPPGPAGIQ
GASGLKGDKGDPGAGLPGARGERGDPGPRGEDGRPGLAGDRGPMGLPGNRGERGDKGDIG
AMGPKGDKGDTVVVEGPAGARGSKGEPGDRGLKGSEGDKGNKGEQGMPGEKGARGEPGEK
GSAGFPGARGPGGQKGEVGVPGEPGEPGLPGRDGIAGARGEKGDMGPLGLRGPKGERGMK
GACGLDGDKGEKGEPGLPGRSGLPGRKGEPGELGLSGAPGVPGKEGLMGPKGDRGFDGQQ
GAKGDQGEKGDRGAPGMIGIPGPRGSDGAPGPPGPPGSVGPRGPEGMQGQKGERGPPGQA
VMGAPGVPGIPGERGEQGNPGAEGLRGEKGDPGMTEEEIRAFVRQEMSQHCACGGQLPRR
LDSREHSGGWGTRTRSILQSAHGGGRSVRQEKEHSQTDHFPHYPPTEPFPDLSAHVVPVL
KVSHAEEEEGQDRRVVVDTNDLEYESMYGEQEDYDTTLDADSSEQLAEDAELCNQPMEEG
GCQRYTLRWYYNQRAAECRPFVYSGCQGNLNRFGSQEECELHCRQRVETGAGSGEGRRPE
A
NT seq
8826 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggaggctcctactcctcgccctgctcctggccccccaggctgctgccgcacag
aagaggagccaagcggtgtgcgagaacgtgctggaggccgacatcgccttcctggtggac
ggctcgtccagcatcggccggaacaacttccgtgccatccgcaccttcgtggaggacctg
gtgtcaccctttgtgcacgtggtgggccagaaggcggtgcgcttcgccgtggtgcagtac
agtgacgatccacgggtggagttcggcttctcccagcataccaatggcacgggcatccag
agggccatccagcagctgagctacaagggtggcaacacacggaccggcgctgggctgcgc
ttcgtctctgacaacttctttggtcccacacagctccggcctggggtcccaaagatctgc
atcctcatcacggatggcaagtcccaggatgatgctgagcagccagcgctgaggctgaag
agcctgggcatcaaggtctttgctgtggggatcaagaatgccgaccgccaggagctgatc
cgtgtggcctcactgcctactgaatccttcttcttctatgtgggtgacttcaagctgctg
gggacactggtgccactgatgacacgcagggtgtgcacaagctcagggggcacgctacgc
acccctgatggacaaggccacgctggtccctccaacctggagatcctggagcacggccct
gatgtgctgcgcatccgctggagcccagccagtggccccgtcaccggctatagggtgcag
cgtgtcccactgacagggctggggcagccgctggcagctgagcggcaggaggtgagcgtg
ggtccgcgggagacaagcactgtgctgcgggggctgcgcgccgggacggagtacctggtg
actgtcatcgctcagtatgccaacagcgtcagcgagtcggtgtctgcgcgggcacgcacc
cagagccgtggcggcgtgcagcatttccatgtggccgaggccgggccgaccttcctgagg
ctgtcgtggcagcccggccccgagccgccccagggctacattctcagctacgccatgcca
ggaatgccccagagcgaggagaggagcctgggggctggtgtgctgtcggccacgctcagc
aacctgcgccccaacaccgagtacgtggtgacgctgcaggcacgctatgcacagcagcct
gcagccaccgccagcctcaccgcacggacacagccaggcacggagcagacgctgcggacc
aacatcctgagccccacatccattcatgtgctctggactgccatccgtgaggctcgtggc
taccgcctggagtggaaaagagccacaggcctggagacccccaggacagtgtcgctgccc
agcagtgccagcacctaccagctgacagggctgcagccaggcactgagtaccgcatcact
ctgtacacgctgtatgaaggtggggaggtggccacccctgtcaccaccttccagacaggt
gtggatgtaccagtgggtgtggtgtcggatctccgtctcatcgaggatttgggcaggagg
gtgcggctgggctggaccggtgtccccggtgccactgagtacaaagtgacagtgcgcaac
acccaggacggcaccgagaggacgagacgcatcccaggcacgcagacagcgctggagctg
ggtgacctgcgggaaggtgtcacctacctggtgcgcatctcagccctcgtgggcagccag
gagggcagtgctgctgcactcagcatccacgtcaagttcccagcggtgggcagtgtctcg
gagctgcgggtgacggagtccgaccccaaccagctgcgggtcacatggagggggctgtcg
ggcgccggggggtaccggctgacatggagggccagtgatggtcaggagcagtcccgcttc
ctccctgccaaccccactgcctacaccattgaggggctgcgagctggcaccgtctatgcc
attggtgtcacagccatcgttgatggccgcgagggtccccctgtcaccaccatggggagg
acagcagctgagcaggtggggacagtatcccggctggaggtgcagtcatccaggagcaat
gttgcccgtgtcacatgggtcggtgtgccaggagccacagcgtatcgtgtggtgtggagc
cgtcgggatgggggctcggagaagagccagcatgttcctggccacatcagctccttcgac
atccccgacctggagggaggtgtctcctacacagtgaaggtcacagcgctcataggcaac
cacgagggcaaccctgtgtccatcatcgttaccaccccggaggcggccccggtgctccct
gttagcaatttgcaggtgatggaggcctcggagcaccgcctgcgcctcgcatgggtgccg
gtgtctggcagcagcggttaccgcctggtctggcgcccagctgagggtggtccccagcgc
agccagcagcttccagccactgccagctcctatgacctgggagggctggagccgggccgg
cgctaccacatcagcatcaccagcatggtgggcagccgggagagcgcaccggtcgccgtc
accagtgccaccgcagcctctctgagccatgccaccagcctgcgagtgacggaggtgcag
agagactctgtgacactctcctggacccctgtccctggtgcttctgaatacgttctgtcc
tggaccccccctgcagcaggcggcgaggcacggcgcgtggtgccgggcactgccagctcc
ctacaggtccctgggctgcgcctgggccagcgctacaccttcaccatccgcccgcttctg
gggagcacacctggtgctgagagctccgtcagcgagcggccagtctgcagggacgcccga
ggggacatcgtcttcctggtgcatggcacacgtgacagctctgctggtgctgacaccgtc
cgcacgctcctctctaacaccgtcaccgccatgggccgcctgggccccgatggcacccag
gtgggtctggccacgtacagctaccgcagcctgccctggctgctcctcaaccgctccagc
gagctgcccgccgtgctggagcaaatccgcaccatgcgctacgaggagcccagcggcaat
gccattggggcagccatcacctttgctaggacttatctgctgagccctggtgcgggacgg
cggcccggtgtgccggcagtgctggtggtgctggctgacggtccctccggggatgatgcc
atcactgctgccagggatgccaaggcagcgggggtccgagtgctggcagtgggcttggag
ggggcagaccaggagcagctccggcgcatggtcagtggtgaggacccacgcttcgtcttc
cgcaaccgtggttccctttcagagctggagggagagctcaccgatgacctctgtaccatc
atctccaccaggccagagccggagccaaagccctgcactgtgcagtgccccaagggagag
aagggggaccctggcgtggcagggccacaggggcgtgtggggcagccgggcccccctgga
gaaccgggccgccatggactgcctggccctccaggacctgtgggaccacgagggccacca
ggagagagcgttgaacagctgggcaagaagggggacaggggcttccctggagctgatggg
cggccagggcttcctggcccccccgggaaccctgggtcccctggccagccgggcaaccag
ggcattcctggcccccgaggggatcctgggccacggggaacagcggggcatcctggcctg
aagggggaaaaaggcgagccgggagagcccagagtgatcacggatggaggacaggggttg
ccaggacgaaaaggggagccaggcacaccgggtagcaccggccctcccggtaaccctggc
ccacgaggtccctttggtgacccaggtcctccgggtccccttgggccaatggggccacca
ggacctccaggagactctgtgaagggggagaagggtgatcgaggggagaggggtccccct
ggactggtcgatggggcagtgcctcaaggggagccgggccccccgggtccacctggggag
cccggcccacggggtcttgctggtactcccggccccaagggtgagaagggtgacggtgag
gagggattcccagggccacctggccgtccaggggaacctggagaccggggcccacgggga
cctccaggagagcaaggcaggaagggagagcgtggggcaccaggagagctgggagagatg
ggacagaagggagaccgcggtgcacctggccccgagggtgagaagggtgagataggagct
ccgggacggccagggccaccgggcagagagggagtaccgggaccagccgggccacggggc
gagaagggtgatgtgggagcgcccggtgaacctggccagccggctcccagcgtgaccagt
gtcagaggagagaagggtgacagaggatttccaggaccagaggggcctcctggccccaag
ggtgatgtaggggagaggggtgcccgtggtgtccctggcctgagcatcccaggaccaact
ggccccaaaggcgagcagggcgagcggggcatcactggtctaactggcaggagcggcccc
aagggtgatgcaggggagccaggcgagaagggtgagccaggcagagtgggtgcaccagga
caaccagggcagcgtggcaaggagggtgagcgtggagagaagggtgatgaaggtgccccg
ggtgaagcaggcgtgcctggcaaacctggagacagaggtccacgggggctgcctgggtac
cgtggcccccctggagagaagggcgacctcggagacccaggtcctgaaggcagaaacggc
attcccggagcacctggcatcaagggtgaccgtggggagccgggccctcctggaccccca
ggacgagctgtggatgtggggcttggaggagcaggagagaagggtgagaagggggatgct
ggggacccaggcgaggatggagcaaagggggccaagggtgagattggcccccccggactg
ccggggttgagtggcattgaaggcccccgcggaccccccggcgcacggggtgaccctggg
gaccgaggcttgcctggagagaagggggagcgtggcccaccagggctggatggccgcaac
gggctggaggggaaacctggccctccgggacccaccgggctgaggggggacccagggaag
cagggagaccctggccgagatgggctgcctgggctgcggggagagcagggaccgcctggc
acaataggaccgctgggacctcctggtatccctggaaaacctggtgacgatggcaaacct
ggcctaaatggcaagaatggagaagatggaacgccaggagaagatgggagaaagggagac
aaaggtgatgccggagcccctggcagagatggccacagcggtgccaagggcgagcagggg
gacagaggcacgcctggccttcctggcccccctggtgtccctggtgtcccagggcaggtc
ggccccccaggccagggctcacccggcctccgtgggatcactggaccaaagggggaccca
ggggagccaggaccacgaggggagccagggcggcctggtgccagcggagaccctgggact
gcagtgaacatcgaacgtagcctggaagccctcggcatcaagatctcttctctgaaggag
ctgacgggtgcctatgatgggagctcggactcctttctgcccgtgtctgaacggctgcgg
gggcagaagggcagccggggggacccaggggagaggggtcccccgggccgggagggttcc
ttaggcttccctggcgagcgaggacccaaaggtgacaaaggggaccaaggtgcccctggt
cctcagggccccgcaggccgggctgtgggcgagcggggcctagaggggccaccagggcag
ccaggggagccaggcaagccgggcatcccaggggtgccgggccgggctggcgagctgggg
gaggctgggcgacctggtgagaagggtgaccggggtgagaagggcgaccggggtgagcag
ggcagagatggattgccaggccctccagggcccccagggctcaaggcagacacaatggag
ggcagcctgatgggcttcccaggcgagcgcggtccccccggacttaagggagtgaagggt
gagcctggtgccgagggcgagcgaggacccaaaggagataagggtgaaggcgggtcacgg
ggtgagcgaggagagcctggcgagaagggcagggatggctctccaggcctcccaggagag
aggggtctggctggccccgaggggaagccgggcttgccaggtttccccggtgtgctgggc
cgcccgggcaatcagggagagccagggcctccaggacctccgggtgctgctggcccacca
gggagccagggtccatctgggatgaagggtaatccaggggaacctggtgccagcatccgg
ggattgcctggtccccagggcagcatggggctgcctggccctccaggaccacctggtctg
gtgggcccaccgggtgctcctgggctgccaggacaagtgggggagagtggcaagccaggt
gtgcctgggcgggatggtgtgccggggaaggacggcgaaccagggatgcccgggaagttg
ggtgtgccaggaccatcaggccctactggccccaaaggggagccaggggatgcgggagca
ccggggcagggcatcgctggccctcctggtgccaagggcgagaagggtgagccagcgctg
ctggagggcgtgctgctgggtgaacctggctccaaaggtgcccgaggtttgcccggcccc
aagggtgagaagggggagcccggaggagctggggagcctggagaccctggcgaagatgga
gccaagggatcatctggagtcaagggggaaaagggcactccaggtgtcggtgtgcgggga
ccaccaggacaggatgggcctccaggtttgaagggtgacatcggtttgccaggacctcct
ggacccccgggattagtgggcattgctggggcaccgggacagccgggcctgagaggggac
agcgggcagcctggcccaccaggagcccctggagagcggggtgcaattggcttccctggg
agggatggtgccgcagggccacctggaccccaagggcccccaggaccagcgggcatacaa
ggggcctcggggctgaaaggtgacaagggtgacccaggagctgggctgccgggagccaga
ggtgaacgtggagacccaggaccacggggtgaagatgggcgcccagggctggcaggtgac
cgtgggccaatgggcttgcctgggaaccgaggggagcgtggggacaagggagacatcggg
gccatggggcccaaaggagacaagggcgataccgttgtggtggaggggcctgctggggcg
agaggcagcaagggggagccgggagaccgtggcctaaagggctccgaaggggacaaaggg
aacaagggggagcagggaatgcccggcgagaagggtgcaaggggtgaaccaggtgagaag
ggctccgcaggcttccctggggcacgcggccctggtgggcagaagggagaagttggtgtg
ccgggggagcctggcgagccgggcttgcctggccgggatggcattgctggagcacgagga
gagaagggggacatggggccactgggcttgcgtggccccaagggtgagcggggcatgaaa
ggcgcctgtggcctcgatggggacaagggtgagaagggagagccagggctgccggggcgc
tcggggctgccaggaaggaagggcgagccgggagaactggggttgtctggagcacccggt
gtccctgggaaggaggggctcatgggacccaagggtgaccgtggcttcgatgggcagcag
ggagccaaaggagaccagggggagaaaggagatcggggtgcaccaggaatgatcggtatc
cctggcccccggggcagtgatggtgctcccggcccccctggccccccaggcagcgttggt
ccacgaggtcctgagggcatgcagggccagaagggggagagaggcccacctgggcaggca
gtgatgggggcccccggtgtgcctggtatccctggtgagcgaggagagcagggcaatcct
ggtgctgagggactccgtggggagaagggggatccaggcatgacggaggaagagatccgt
gccttcgtcaggcaggaaatgagccagcactgtgcatgtggagggcagctcccgcggcgc
ttggattcccgtgagcactcaggaggatgggggactcggaccaggagcatccttcagtct
gcccatggaggagggagaagtgtccgccaagagaaggagcacagccaaacagatcacttc
ccccattacccacccactgagccattcccagatctcagtgctcatgtcgtccccgtgctt
aaagtgtcacacgcagaggaggaggaggggcaggacaggcgtgttgtcgttgacaccaat
gacctggagtacgagagcatgtatggggagcaggaggactatgacactactctggatgca
gacagctcggagcagctcgcagaggatgccgagctctgcaaccagcccatggaggagggg
ggctgccagcggtacacactgcgctggtactacaaccaaagagccgccgagtgccggccc
ttcgtctacagcggctgccagggcaatctcaaccgcttcggcagccaggaggagtgtgag
ctccactgcaggcagcgcgtggagacaggtgctggcagcggggaaggacggcggccggag
gcgtag
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integrated database retrieval system
