Meleagris gallopavo (turkey): 104913371
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Entry
104913371 CDS
T01523
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104913371 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mgp01001
]
104913371 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mgp04054
]
104913371 (CIITA)
Enzymes [BR:
mgp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104913371 (CIITA)
Protein kinases [BR:
mgp01001
]
Serine/threonine kinases: Other
TAF1 family
104913371 (CIITA)
Pattern recognition receptors [BR:
mgp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104913371 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
NB-ARC
LRR_14
LRR_9
nSTAND_NTPase5
nSTAND3
RsgA_GTPase
NPHP3_N
AAA
Motif
Other DBs
NCBI-GeneID:
104913371
NCBI-ProteinID:
XP_010717721
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Position
16:complement(4497070..4531213)
Genome browser
AA seq
1169 aa
AA seq
DB search
MMPKKLSVNLHIQEAETGTASLPHAAERSLTFAVRVSSSQLSGGQNFSICSSAPQDDNKR
QIMDSASVSENGYLDLLLCDIDPVHLFTFSDPKSSGNEGEFFADPEIDTCNYEQFNNMDF
LCTMENDENEDELYLSSSARDAYARIAELAEYVLKDQHEKQVEDVFAGSLILDEMVLENT
EKFTDVKKQKCHKRTFLSSAENCSDASEPKYKKIVDAPAVSTGNGCFLTMSLNSHSSDCT
PLTHQHMPFSATTINALGNFVIPGSSIPLIPESLPLGMKDNRENIDFVDPAQQKINYFLG
NGPSNAIKYPALTSSTELMVSPSFQVNLNGLEMYKEVQVPVILSEETSRRPRSVEAFRTS
LMDYFRDVCKSVSVEREISLDHMYIDGTLRQSQIETKPGKNSVRSVERDSITYSQKGKEK
AVLERSQIFQIPGGKELETKVIVVLGKAGMGKSILVQKICQDWSNGEFPQFEFVFWFDCK
QISLPEKWYSLKDLLLDFFVKPQEGSKEIFEYILQNSTKVLLVFDGLEGLHGHENFPHCS
ASQPNKDLCRMKELLSGLIQKKVLNGCTLLLTARTKEKVCQYVSKVDKTIEIVGFSPLQR
ELYITKYFEGLPSCDNALNLIKEREYLFSHCYSPVMCRFVCFFCEAILEMGDQGLPSTLT
TLFLKFVQQKIMPTQTDVTDVTVAQNQENLATLACIAWYLGEKHQSAMKSDLLPSKKVKE
FALKNGFFLPFAFPKHSGTGEEEYGTMFSDFVIQNFLGALHLILAEGIKDKSLIKYLSFP
SKKKKPYNWLHLVPRFLAGLLFLQDDIFCSSNKSVKKSTKKQKMLLKYIKRLQINNLCPE
RLLELLHCIYETQNNYLLQHVALRLKPDLSFLGIVLTPPDVHVLSSTLKKSRKEFSLDLQ
NSSIDTHGLKDLVGLKNVTSFRASLSDTIKLWKYLEKTKDYELLRVSTEKFVLDPFKAKT
MKDISDLSDLVEMQEIIINSVQDASGCSNYEIPAVKNLRKLEFALGPACGLQGLLKLVEI
LAAFPSLQHLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQNKITDVGAEKLATAL
PSLSSLTTLSLYNNSICDFGAENLAKVLPAMASLRVLDIQYNKITGVGAQQLTDSLRKCP
HIKNLVMWNPTIPYGVLEHLQQLDSRISV
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaaaaaaactttctgtaaatctccatatccaagaagctgagactgggactgcc
tctcttccccacgctgcagaacgctcattgacgtttgctgtgagagtaagcagctcccag
ctttctggagggcagaacttcagcatatgctcttctgctcctcaagatgacaacaagaga
caaatcatggattcagcatctgtgtctgaaaatggctaccttgatttgctgctttgtgat
attgatccagtgcatctatttacattctcagatcctaagtcatctggaaatgaaggtgaa
ttctttgcagatcctgaaattgatacctgcaactatgaacaattcaataatatggatttc
ctgtgtacaatggaaaatgatgaaaatgaggatgaattgtatctttcttccagtgccaga
gatgcttatgccagaatagctgaattagcagaatatgtgctcaaggaccagcatgagaag
caagtggaagacgtttttgcagggagccttattttggatgaaatggttcttgaaaacact
gagaaattcactgacgtaaagaagcagaaatgtcacaaaagaacctttttaagctctgca
gagaattgctctgacgcttcagaacctaaatacaagaaaattgtggatgcccctgcagta
tcaacagggaatggatgtttccttacgatgtctctcaacagccattcatctgactgcacc
ccactaactcaccagcacatgcccttttctgctaccactatcaatgcactgggaaatttt
gtaattcctgggtcttcaatacctttgattccagagagtctgccacttggcatgaaagac
aacagagagaacatagactttgtggatcctgctcagcagaaaattaattattttcttgga
aatggcccatctaatgctataaaatatccagcactgacttcctccactgaattaatggta
tccccaagttttcaagttaatttaaatggcttagaaatgtacaaagaagtccaagttcca
gtaattctttctgaagaaacttcaagaagaccaaggtcagtggaagctttccgtacatca
cttatggattacttccgagatgtatgcaaatctgtgtctgtggagcgtgaaatatctctt
gatcacatgtatattgatggtacacttaggcaaagccaaattgaaaccaagcctgggaag
aacagcgtaagatcagtagaaagggactcaattacttacagtcagaaagggaaggaaaag
gcagtacttgaaagaagccaaatatttcaaatcccaggaggtaaagagttagagactaaa
gtgattgtggtgctgggaaaagcaggaatgggcaaaagcattcttgttcagaagatctgc
caggactggtccaatggagagtttcctcagtttgaatttgtcttttggtttgactgcaaa
caaataagcttgcctgagaagtggtacagcttgaaagatctacttcttgatttttttgta
aaacctcaggagggaagcaaagagatcttcgagtatatacttcaaaattctactaaagtc
cttctggtttttgatggtttggaagggttgcacggccatgagaattttcctcattgttca
gccagccagcctaacaaagacttgtgccgcatgaaggagctgctttcgggactcatccaa
aagaaggtactcaatggctgtacgttattacttacagcaagaacaaaagaaaaggtgtgc
cagtatgtgtccaaagtggataagactattgaaatagtaggattctcccctctgcagaga
gaactgtacataaccaaatactttgaaggattaccctcatgcgataatgcactgaattta
atcaaagagcgtgagtacctcttcagtcattgttacagccctgttatgtgtagatttgtt
tgttttttctgtgaggcaatacttgaaatgggagaccaaggccttccttcaacccttact
acactcttcctgaaatttgttcagcaaaaaataatgcctacgcaaacagatgttacagac
gttacagttgcacaaaaccaagagaatcttgctacactagcctgtatagcctggtatctt
ggagaaaagcaccaaagtgccatgaaaagtgatcttcttccatctaagaaagttaaagag
tttgctctgaaaaatggatttttcctgccatttgcattccccaaacattcaggtacagga
gaagaggaatacgggaccatgttctccgattttgtcattcagaatttcttgggtgcactt
caccttatattagcagaaggcatcaaggacaaaagtctaataaaatatctgtcttttcca
tccaaaaagaagaaaccttataactggttacatttagtgcctcgatttttggctggattg
ttattccttcaggatgacatcttctgctcttcaaacaagagtgtaaaaaaatcaaccaag
aagcagaaaatgctcctgaaatatattaaaaggttgcaaataaacaacctctgtccagag
aggttacttgagcttttgcactgtatttatgaaacacaaaacaattatctcttgcagcat
gtggccttgaggctcaagccagacctgtcctttctgggcattgttcttacaccaccagat
gtccatgtactgtcctctactttaaagaaatcaagaaaagaattttccttggatttgcag
aacagcagtattgacacgcacgggctaaaagatttggttggcctgaagaatgtgacatca
ttcagggcctccctgagtgatacaatcaagctatggaaatatttagaaaagacaaaagac
tatgaactgctgagagtgtcaacagaaaaatttgttcttgatccctttaaggcaaagaca
atgaaagacatcagtgacctttctgaccttgtagaaatgcaggagataataatcaatagt
gttcaagatgcctccggttgcagcaactatgaaattcctgccgtaaaaaacctgagaaaa
ctagaatttgctctgggtccagcgtgtggccttcagggactcctaaaactcgtggaaatt
cttgcagcatttccatcactgcagcatttagaccttgatgctctgagtgaaaatggaata
ggagacgaaggagcaaagagtctgtctgaagtctttccaacactgacatcactggaaaca
ttaaacttatcacagaataagataacagatgtgggcgcagagaaactagctacagccctt
ccctccttgtcttcattaacaacactgagcttatacaacaatagcatttgtgattttgga
gcggaaaaccttgcaaaagtccttcctgcaatggcttctttaagagtgctggacattcag
tataacaaaataactggtgttggagcccaacagctgactgacagcctaagaaaatgcccc
catataaaaaatttggtgatgtggaatcctacaattccatatggagttcttgaacacctt
caacagctggactctagaatcagtgtgtag
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