Pyricularia oryzae: MGG_00680
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Entry
MGG_00680 CDS
T01027
Name
(RefSeq) mRNA 3'-end-processing protein yth-1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
mgr
Pyricularia oryzae
Pathway
mgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MGG_00680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgr03021
]
MGG_00680
03019 Messenger RNA biogenesis [BR:
mgr03019
]
MGG_00680
Transcription machinery [BR:
mgr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
MGG_00680
Messenger RNA biogenesis [BR:
mgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
MGG_00680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_4
zf-CCCH_9
zf-CCCH_2
zf-CCCH_DUS3L
zf-CCCH_RBM22
Motif
Other DBs
NCBI-GeneID:
2674432
NCBI-ProteinID:
XP_003718334
UniProt:
G4NAY8
LinkDB
All DBs
Position
5:2033933..2035331
Genome browser
AA seq
276 aa
AA seq
DB search
MASPSVAKIADAMLAHSAPKYSFSFTPFLQQTYQHSLPSDRPICKVYASGGNCPNGTRCL
ERHVADPSQLSNAQSGYGSGKRDGPAFNSLVCKHWLRGLCKKGDGCEFLHEYNLRRMPEC
NFYIRNGYCQNGEECLYLHIDPQSKLPPCPHYDQGFCPLGPRCSKKHVRRNLCPYYLCGF
CPDGRLCKQGAHPGWNPKLDPPTVKVEKPAGEEDAMGFAARGGAYDDHEDGDRGGQQRGD
RRGGYGQRDGKFGGGGGGGRGGWRGRGGGHRGRGRY
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcatccccaagcgtggccaaaatcgccgacgcgatgctcgcgcactcggcgcccaag
tacagcttctccttcacgccgttcctgcagcagacgtaccagcacagcctgccgtcggac
cgaccgatatgcaaagtctacgcgtcgggcggcaactgccccaacggcacgcggtgcctg
gagcggcacgtcgccgacccgtcgcagctctccaacgcccagagcggatacggcagcggc
aagcgcgacggccccgccttcaacagcctggtgtgcaagcattggctgcgcggcctgtgc
aaaaagggcgacgggtgcgagttcctgcacgagtacaacctgcgccgcatgccagagtgc
aacttttacatccgcaacggctactgccagaacggcgaggagtgtctgtacctgcacatt
gatccgcagagcaaactgccgccttgtccgcactatgaccagggcttttgtccgctcggc
ccccggtgcagcaagaagcacgtcaggcggaacctgtgtccctactacctctgcggcttc
tgtcccgacggtaggctgtgcaagcagggtgctcaccccggctggaatcccaagctggac
ccgccgacggtcaaggtcgagaagccagctggcgaggaggatgctatgggttttgccgcg
aggggaggggcctacgatgatcacgaagatggcgataggggtggacagcagaggggcgat
aggaggggaggttatgggcagcgggatgggaagtttggtggtggtggtggtggtgggagg
ggcggttggagaggccgcggcggaggtcataggggtaggggacggtactga
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