Pyricularia oryzae: MGG_00685
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Entry
MGG_00685 CDS
T01027
Name
(RefSeq) replication factor-A protein 1
KO
K07466
replication factor A1
Organism
mgr
Pyricularia oryzae
Pathway
mgr03030
DNA replication
mgr03420
Nucleotide excision repair
mgr03430
Mismatch repair
mgr03440
Homologous recombination
mgr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MGG_00685
03420 Nucleotide excision repair
MGG_00685
03430 Mismatch repair
MGG_00685
03440 Homologous recombination
MGG_00685
03460 Fanconi anemia pathway
MGG_00685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mgr03000
]
MGG_00685
03032 DNA replication proteins [BR:
mgr03032
]
MGG_00685
03400 DNA repair and recombination proteins [BR:
mgr03400
]
MGG_00685
Transcription factors [BR:
mgr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
MGG_00685
DNA replication proteins [BR:
mgr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
MGG_00685
DNA repair and recombination proteins [BR:
mgr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
MGG_00685
MMR (mismatch excision repair)
MGG_00685
DSBR (double strand breaks repair)
HR (homologous recombination)
MGG_00685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
LplA-B_cat
Motif
Other DBs
NCBI-GeneID:
2675023
NCBI-ProteinID:
XP_003718324
UniProt:
G4NAX8
LinkDB
All DBs
Position
5:1997991..2000740
Genome browser
AA seq
610 aa
AA seq
DB search
MADAAERQITRGAIAAIFNDPEGVKTRFPVPVLQCLQVKLLGQQPNAGAAERYRVVLSDV
DNYIQCMLATQANHVIHDDQLQRGCIVRVKSYQANTVKGKSVLVLLDLEVIQSLGVHEKI
GEPASIEAKAENTTNTTIGGSGFYGTKTEPDVKPQIRSQMPTRNTGGGGASHGPGNVNIY
PIESISPYQHKWTIKARVSQKSDIRTWHKASGEGKLFSVNLLDETGEIKATGFNDQCDKF
YDILQEGQVYYISTPCRVQMAKKQFTNLPNDYELTFEDGTQIEKAEDQSSVPQVRFNFCN
IQELQEVEKDATVDVIGVLKDVADVTQITSKASGKFFDKRELTLVDDSGYSVRMTIWGKT
AQNFDAKSESVVAFKGAKVGDFGGRSLSLLSSGTMTVDPDIPEAHRLKGWFDSSGRNDNF
STFNSNSVAGATGRQDQILTIHKVKEDNLGVDDVVYFALKATVVYIRQENFAYPSCLNEG
CSKKVTDLGDGSWRCEKCDVNHPRPEYRYIMSVNVNDHTGQLWLSCFDDVGRIIMGKSAD
ELMALKDENFEAFTREFENANCRKLSFRCRAKMDTFGDNQRVRYQVMGATKMDWKSEAAR
LADLIKQFNI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgcagctgagcggcaaataacccgcggcgctatcgctgccattttcaatgac
ccggaaggtgtcaagactcgcttcccggtgccagtactacaatgtctgcaagtcaagctt
ctcgggcagcagcccaacgctggcgccgctgaaaggtatcgcgtggttttgagcgatgtc
gacaattacatccagtgcatgctggccacacaagcaaaccatgtcatccacgacgatcag
cttcaaagaggttgcatcgtgcgcgtcaagtcataccaagccaacactgtcaagggcaag
agtgtattggtcttattggatcttgaagtcatacagtctctcggagtacatgaaaagatc
ggtgagcctgccagcatcgaggccaaggctgaaaacaccacgaacaccaccatcggtgga
tcgggcttctatggcaccaagaccgaaccggacgttaaaccacagatccgctctcagatg
ccaacccgcaacaccggtggtggtggagcttcgcacggtcctggcaacgtcaacatctat
ccgatcgagtccatctcgccataccaacacaagtggacgatcaaggcccgggtgtcacaa
aagtccgacattaggacatggcacaaggcaagtggtgagggcaagctcttcagtgtcaac
cttctggatgagaccggcgagatcaaggctactggcttcaacgaccaatgcgacaagttc
tacgacatacttcaagaaggccaggtctactacatctccaccccgtgccgcgttcagatg
gccaagaagcagtttacaaatcttcccaacgactacgaactcaccttcgaggatggcact
cagattgagaaggctgaagaccagagcagtgtgcctcaagtacgctttaacttttgcaac
atccaagagctgcaggaggtagagaaggacgccacagtagatgttattggtgtcctcaag
gacgtcgccgacgttactcagatcacctccaaggccagtggcaagtttttcgataagcgc
gagctgacgctcgttgatgacagcggctactcggtgcgcatgacgatctggggcaagacg
gcgcagaactttgatgccaaatcagagtcagtggtggccttcaagggtgccaaggtcggt
gattttggaggtcgttcactttcattgctgtcttccggtacaatgaccgtggaccccgat
attcctgaggcacaccgccttaagggctggttcgactcgtctggcagaaatgacaacttc
agcactttcaactcgaacagtgttgctggtgctactggccggcaagatcaaatattaacg
attcacaaggtcaaggaggataatctgggtgtagatgatgtggtgtactttgctctcaag
gcgacagttgtctatatccgccaagagaatttcgcatacccatcctgcctcaacgagggc
tgcagcaagaaagttacagatcttggtgatgggagctggcgttgcgagaaatgcgatgtc
aaccacccgcgaccggagtaccgttacattatgagtgtcaacgtgaacgatcacaccggt
cagctgtggcttagctgtttcgacgatgttggtcgaatcataatgggcaagtcagcagac
gagctgatggcgctcaaggatgagaatttcgaagccttcactcgggaatttgagaatgca
aactgcaggaagctcagtttcaggtgtcgtgccaagatggacacgttcggagacaatcag
agagttcgctaccaggtcatgggcgccaccaagatggactggaagagcgaggcagccaga
cttgctgatttgatcaagcaattcaacatctga
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