Pyricularia oryzae: MGG_00896
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Entry
MGG_00896 CDS
T01027
Name
(RefSeq) exosome complex exonuclease Rrp
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
mgr
Pyricularia oryzae
Pathway
mgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MGG_00896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgr03019
]
MGG_00896
Messenger RNA biogenesis [BR:
mgr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
MGG_00896
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
YL1
SRP-alpha_N
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
2674633
NCBI-ProteinID:
XP_003718068
UniProt:
G4NDP6
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All DBs
Position
5:complement(1206566..1210190)
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AA seq
828 aa
AA seq
DB search
MEEPLDFKALQDKIQAALVATTRKVNLIATQDIAFRRSVDPEAGELLDEQREKLLSLASS
LVNTAASLGGGKSSKPKRALELEDAEEVDDNWQAIVDSLDIALEKADTCIDEYTGLVKRK
DAPTADMGPTAKKSKPGILDRSLRYANIIKPQKAFEVPPKNHDKGPWKPLLTKKPHAIVP
LDKSLATFDNEDAETQYKHPYETEILQSRHPESVYQKRDPIPYTPIAKSSPTYVDTYEGV
LEMLEDLKQAKEIAVDLEHHDFRTYHGLLSLMQISTREKDWIVDTLKPWRQQLEILNEVF
ADPSIVKVFHGAFMDIVWLQRDLGLYVVGLFDTFHAAEALMYPSKSLAYLLKKFVDFEAD
KRYQTADWRIRPLPEEMLYYARSDTHYLLYVYDMMRNELLRQSVSGDPHRDLLERTLQRS
KDTALQRYEAYTIDGETGRGSRGWFNLIHRLPNTFSREQFSVYRALHKWRDDVARREDES
PMFLMSNQLLVDIARAMPETANDLRRLFTNVGPPVRNAVDELVDLIQDSRQKGATGPSLL
EVIKADSANAAFSNMTLTDAYRSAKTTNAGQGDDDIPDAVEVAGSRSQLWGNLPMSTLWE
KVSNKVASSAREDEDHIAVPWSSFVANAQVTEDDGTGALGQADVDEMDLDEDGGAPLKLE
VETAPEAKDEQFTLRSGRSEGTGRTQQDNDSSDSSSDEDSEEKERLKAEKQQRKQERRAL
KQKLKEEKAAKKAEEKAARKAEKKALKAAAKAEEVEEDDGEESDDEQPFDYSKAQSVMRS
KRDHGADKKGSGGAKVFDPYTSKTTAQGPKPARRMNFEKPGKTATFKK
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaccgctcgacttcaaagctctgcaggacaagatccaagcagcgctcgtcgca
accacccgcaaggtcaacttgatcgcgacccaggacattgccttccgccgtagtgtcgat
ccggaggccggagagctgttggatgagcagcgtgagaagctcctaagcttggcatcatca
ctggtcaacactgccgcgagcttgggaggcggcaagagctccaagcccaagagagctttg
gagctggaagacgccgaagaagttgatgacaactggcaggccattgtcgactcgctggat
atcgccctcgagaaagccgatacctgcatcgacgagtatacaggacttgtgaagaggaag
gatgcgccgactgcagacatgggcccaaccgccaaaaagtcgaaaccgggcatacttgat
cgatccttacgctacgcaaacatcatcaagccccaaaaggcgtttgaagttccgcccaag
aaccatgacaagggcccttggaagccacttttgaccaagaagcctcacgctatcgtcccc
cttgacaagagcttggccaccttcgataacgaggatgcagagacacagtacaaacatccg
tacgagacagaaatactgcaatcgaggcacccagaaagcgtatatcagaagcgcgacccc
ataccgtacacgcccatcgctaaatcctcgccgacctatgtcgatacctacgaaggtgta
ctggagatgctggaggatctcaagcaggccaaggaaatcgcagttgacctagagcatcat
gacttcagaacctaccacggactcctctcgctgatgcagatcagtaccagagagaaggac
tggattgttgatactctgaagccatggaggcaacaactggagattctgaacgaagtgttt
gctgacccgagcattgttaaggtgttccacggcgccttcatggatattgtgtggcttcag
agggatttggggctttacgttgtcgggctcttcgatactttccacgcggctgaggcgctc
atgtatcctagcaagagccttgcgtacctcctcaaaaagtttgtcgatttcgaggcggac
aagcgttatcagactgccgattggcgaatcaggccattacccgaggaaatgctttattat
gcccgctcggatacgcattacctgctgtatgtgtatgatatgatgaggaacgagctcctg
aggcaatccgtcagcggcgatcctcacagggatctactcgagaggacgctccagaggtcg
aaagacacggctctccagcgttacgaggcatatactatcgacggagaaacaggtcgaggg
tcgcgcggctggttcaatctgattcaccgattgccaaacacttttagcagagagcagttt
tccgtctaccgagcactgcacaagtggcgcgacgatgtggcgcgacgagaggacgagagc
cccatgtttttgatgtcaaaccagttactcgtggacatcgcacgggctatgccagagacg
gctaacgatctacgcaggctcttcacaaatgtgggcccgccagtgaggaacgccgttgac
gagcttgtggatctgatacaagattctcgacaaaagggggcgactggcccatctcttttg
gaggtcatcaaagccgatagtgccaatgctgcattctccaacatgactttaacggacgca
tatagaagtgcgaagacgacaaacgcaggccaaggcgatgatgatatacctgatgcagta
gaggttgcaggctcacggtcacagttatggggcaatcttccaatgagcaccttgtgggag
aaggtatctaacaaggtagcttcatcggctagagaagatgaagaccatattgctgtaccc
tggagctcgtttgtcgccaatgctcaggttactgaagatgatggcacgggtgctttaggc
caggcagatgtggatgagatggatcttgatgaagacggaggcgccccgctcaagctggaa
gtcgaaacggcccccgaagcaaaagatgaacagtttacgctgcgctctggacgttcagaa
ggaacagggaggacacagcaagacaatgattcgtcagacagctcgtctgatgaggactct
gaagagaaagagcgtctcaaggctgagaagcaacagcgaaagcaagaaagacgtgcactg
aagcagaagctcaaggaggagaaggctgcaaagaaagcggaggaaaaggctgccaggaaa
gcagagaaaaaagcactgaaggcggctgccaaagccgaagaagtcgaggaagatgacggc
gaggagagtgacgacgagcagcctttcgactacagcaaggcacagtcagtcatgcgtagc
aagcgggatcatggagctgacaagaagggcagcggtggtgctaaggtcttcgatccatat
accagcaagacgactgcgcaaggtcccaagccggcaaggagaatgaatttcgaaaaacct
ggcaagactgcgacattcaagaagtaa
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