KEGG   Pyricularia oryzae: MGG_00896
Entry
MGG_00896         CDS       T01027                                 
Name
(RefSeq) exosome complex exonuclease Rrp
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
mgr  Pyricularia oryzae
Pathway
mgr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mgr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MGG_00896
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mgr03019]
    MGG_00896
Messenger RNA biogenesis [BR:mgr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     MGG_00896
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC YL1 SRP-alpha_N TFIIF_alpha
Other DBs
NCBI-GeneID: 2674633
NCBI-ProteinID: XP_003718068
UniProt: G4NDP6
LinkDB
Position
5:complement(1206566..1210190)
AA seq 828 aa
MEEPLDFKALQDKIQAALVATTRKVNLIATQDIAFRRSVDPEAGELLDEQREKLLSLASS
LVNTAASLGGGKSSKPKRALELEDAEEVDDNWQAIVDSLDIALEKADTCIDEYTGLVKRK
DAPTADMGPTAKKSKPGILDRSLRYANIIKPQKAFEVPPKNHDKGPWKPLLTKKPHAIVP
LDKSLATFDNEDAETQYKHPYETEILQSRHPESVYQKRDPIPYTPIAKSSPTYVDTYEGV
LEMLEDLKQAKEIAVDLEHHDFRTYHGLLSLMQISTREKDWIVDTLKPWRQQLEILNEVF
ADPSIVKVFHGAFMDIVWLQRDLGLYVVGLFDTFHAAEALMYPSKSLAYLLKKFVDFEAD
KRYQTADWRIRPLPEEMLYYARSDTHYLLYVYDMMRNELLRQSVSGDPHRDLLERTLQRS
KDTALQRYEAYTIDGETGRGSRGWFNLIHRLPNTFSREQFSVYRALHKWRDDVARREDES
PMFLMSNQLLVDIARAMPETANDLRRLFTNVGPPVRNAVDELVDLIQDSRQKGATGPSLL
EVIKADSANAAFSNMTLTDAYRSAKTTNAGQGDDDIPDAVEVAGSRSQLWGNLPMSTLWE
KVSNKVASSAREDEDHIAVPWSSFVANAQVTEDDGTGALGQADVDEMDLDEDGGAPLKLE
VETAPEAKDEQFTLRSGRSEGTGRTQQDNDSSDSSSDEDSEEKERLKAEKQQRKQERRAL
KQKLKEEKAAKKAEEKAARKAEKKALKAAAKAEEVEEDDGEESDDEQPFDYSKAQSVMRS
KRDHGADKKGSGGAKVFDPYTSKTTAQGPKPARRMNFEKPGKTATFKK
NT seq 2487 nt   +upstreamnt  +downstreamnt
atggaggaaccgctcgacttcaaagctctgcaggacaagatccaagcagcgctcgtcgca
accacccgcaaggtcaacttgatcgcgacccaggacattgccttccgccgtagtgtcgat
ccggaggccggagagctgttggatgagcagcgtgagaagctcctaagcttggcatcatca
ctggtcaacactgccgcgagcttgggaggcggcaagagctccaagcccaagagagctttg
gagctggaagacgccgaagaagttgatgacaactggcaggccattgtcgactcgctggat
atcgccctcgagaaagccgatacctgcatcgacgagtatacaggacttgtgaagaggaag
gatgcgccgactgcagacatgggcccaaccgccaaaaagtcgaaaccgggcatacttgat
cgatccttacgctacgcaaacatcatcaagccccaaaaggcgtttgaagttccgcccaag
aaccatgacaagggcccttggaagccacttttgaccaagaagcctcacgctatcgtcccc
cttgacaagagcttggccaccttcgataacgaggatgcagagacacagtacaaacatccg
tacgagacagaaatactgcaatcgaggcacccagaaagcgtatatcagaagcgcgacccc
ataccgtacacgcccatcgctaaatcctcgccgacctatgtcgatacctacgaaggtgta
ctggagatgctggaggatctcaagcaggccaaggaaatcgcagttgacctagagcatcat
gacttcagaacctaccacggactcctctcgctgatgcagatcagtaccagagagaaggac
tggattgttgatactctgaagccatggaggcaacaactggagattctgaacgaagtgttt
gctgacccgagcattgttaaggtgttccacggcgccttcatggatattgtgtggcttcag
agggatttggggctttacgttgtcgggctcttcgatactttccacgcggctgaggcgctc
atgtatcctagcaagagccttgcgtacctcctcaaaaagtttgtcgatttcgaggcggac
aagcgttatcagactgccgattggcgaatcaggccattacccgaggaaatgctttattat
gcccgctcggatacgcattacctgctgtatgtgtatgatatgatgaggaacgagctcctg
aggcaatccgtcagcggcgatcctcacagggatctactcgagaggacgctccagaggtcg
aaagacacggctctccagcgttacgaggcatatactatcgacggagaaacaggtcgaggg
tcgcgcggctggttcaatctgattcaccgattgccaaacacttttagcagagagcagttt
tccgtctaccgagcactgcacaagtggcgcgacgatgtggcgcgacgagaggacgagagc
cccatgtttttgatgtcaaaccagttactcgtggacatcgcacgggctatgccagagacg
gctaacgatctacgcaggctcttcacaaatgtgggcccgccagtgaggaacgccgttgac
gagcttgtggatctgatacaagattctcgacaaaagggggcgactggcccatctcttttg
gaggtcatcaaagccgatagtgccaatgctgcattctccaacatgactttaacggacgca
tatagaagtgcgaagacgacaaacgcaggccaaggcgatgatgatatacctgatgcagta
gaggttgcaggctcacggtcacagttatggggcaatcttccaatgagcaccttgtgggag
aaggtatctaacaaggtagcttcatcggctagagaagatgaagaccatattgctgtaccc
tggagctcgtttgtcgccaatgctcaggttactgaagatgatggcacgggtgctttaggc
caggcagatgtggatgagatggatcttgatgaagacggaggcgccccgctcaagctggaa
gtcgaaacggcccccgaagcaaaagatgaacagtttacgctgcgctctggacgttcagaa
ggaacagggaggacacagcaagacaatgattcgtcagacagctcgtctgatgaggactct
gaagagaaagagcgtctcaaggctgagaagcaacagcgaaagcaagaaagacgtgcactg
aagcagaagctcaaggaggagaaggctgcaaagaaagcggaggaaaaggctgccaggaaa
gcagagaaaaaagcactgaaggcggctgccaaagccgaagaagtcgaggaagatgacggc
gaggagagtgacgacgagcagcctttcgactacagcaaggcacagtcagtcatgcgtagc
aagcgggatcatggagctgacaagaagggcagcggtggtgctaaggtcttcgatccatat
accagcaagacgactgcgcaaggtcccaagccggcaaggagaatgaatttcgaaaaacct
ggcaagactgcgacattcaagaagtaa

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