KEGG   Pyricularia oryzae: MGG_01804
Entry
MGG_01804         CDS       T01027                                 
Name
(RefSeq) endoribonuclease YSH1
  KO
K14403  cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
mgr  Pyricularia oryzae
Pathway
mgr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mgr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    MGG_01804
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mgr03021]
    MGG_01804
   03019 Messenger RNA biogenesis [BR:mgr03019]
    MGG_01804
Transcription machinery [BR:mgr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     MGG_01804
Messenger RNA biogenesis [BR:mgr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     MGG_01804
    U7-dependent histone pre-mRNA processing factors
     MGG_01804
SSDB
Motif
Pfam: CPSF73-100_C Beta-Casp Lactamase_B_6 Lactamase_B Anti-Pycsar_Apyc1 RMMBL Lactamase_B_3 Lactamase_B_2
Other DBs
NCBI-GeneID: 2679383
NCBI-ProteinID: XP_003714815
UniProt: G4MVU2
LinkDB
Position
2:complement(4903695..4907469)
AA seq 829 aa
MASKRKASAMNVAAPDEPVDPADELVFTCLGGGNEVGRSCHIIQYKGKTVMLDAGQHPAY
DGLAALPFFDDFDLSTVDVLLISHFHVDHAASLPYVLSKTNFKGRVFMTHPTKAIYKWLI
QDSVRVGNTSSNPTSQPVYTEQDHLNTFPQIEAIDYYTTHTISSIRITPYPAGHVLGAAM
FLIEIAGMNIFFTGDYSREQDRHLVSAEVPRGVKIDVLITESTYGIASHVPRVEREQALM
KSITGILNRGGRVLMPVFALGRAQELLLILDEYWGKHQEYQKVPIYYASNLARKCMVVYQ
TYVGAMNDNIKRLFRERLAEAEASGKSGAGGGGPWDFKYIRSLKNLDRFDDLGPCVMLAS
PGMLQNGVSRELLERWAPSDKNGVVITGYSVEGTMAKQIMQEPEQIPAIMTRNAAAASRR
ADGEKPMIPRRCSVAEFSFAAHVDGTENREFIEEVAAPVVILVHGEQNNMMRLKSKLLSL
NATKTEKVKIYSPRNCEELRIPFKTDKTAKVVGKLASITPPTRLPTDDDYHLHPQLVTGV
LVQNDFKLSLMAPEDLREYAGLTTTTIVCRQKIMLAAAGVDLIRWALESTFGAVDELPEM
RQLHKEVPNGDDMILDAKEEEVVDEEVERPVAGYIVMGSINVRCFGSGEVELEWEGNTMN
DGFADAVMAVLLTVESSPAAVKKSASKHSHSHAPQEEYVLPTRNLHARLSPEERLERLFM
FLEAQFGADHVSPIKDPRLPVSDDTSGEAENGDDDGGRQQRLEERQRAEIERLHKIGIPV
PGVAIKIDDKLNAKVWLEDLEVECANKAFGDRVRVVVERAVEVTAPLWG
NT seq 2490 nt   +upstreamnt  +downstreamnt
atggcatcaaagaggaaggcctcggccatgaacgtggcagcacccgacgagcccgtagac
cccgccgatgagcttgtctttacttgtcttggaggcggaaacgaggttgggcgatcatgc
cacatcatacagtacaaaggcaagactgtaatgcttgatgccggacaacatcctgcttac
gatggcctggccgccttgcccttcttcgatgacttcgatttgagcactgtcgatgtgcta
ctaatcagccatttccacgtcgatcacgccgcctctctgccctatgtattatcaaagacc
aacttcaaaggccgcgtctttatgacgcatccaaccaaagctatttacaaatggcttatc
caggacagtgtccgtgtgggcaacacttcgtcgaatccgacatcacagcccgtatacacg
gaacaggatcacctgaacacattcccacagattgaggccatcgactactacacaacacac
acaatatcctccatacgcattactccatatccggctggtcatgtgttgggcgcagctatg
tttctgatcgagatagcggggatgaatattttcttcacgggcgactattcacgagagcaa
gatcggcatctggtgtcggctgaggtacccaggggtgtcaagatcgacgtgcttatcaca
gaatcgacatatggtattgcatcacacgtgcctcgagtagagcgcgagcaggcgctcatg
aagtcaatcacgggcattctgaaccgcggagggcgagtactcatgcccgtcttcgccttg
ggaagagcacaggagctgttgttgattctggacgagtactggggcaagcaccaggagtac
caaaaggtaccaatctactatgcgagtaaccttgcccgcaagtgtatggttgtataccag
acgtacgtgggcgcgatgaatgacaacatcaagcgactcttccgcgagcgcctcgccgag
gccgaagcatcgggcaagagcggggccggtggcgggggcccttgggacttcaagtacatt
cgatcgctcaagaatctggaccgctttgacgacctcggcccgtgcgtcatgcttgccagc
ccgggtatgttgcagaacggagtgagccgcgagcttctcgagcgctgggctccgagcgac
aagaacggcgttgtcatcaccggttacagtgtcgagggcaccatggcgaaacagatcatg
caggagcccgagcagatccctgccatcatgacccggaatgctgccgcagcttcaaggcgt
gccgacggcgagaagcccatgatcccgcgtcgctgtagcgtcgcagagttctcctttgct
gcacacgttgacggcacagagaatagggagtttatcgaggaggttgctgctcctgtagtt
atccttgttcacggagagcaaaacaacatgatgaggttgaagtcaaagcttctatcgctt
aatgccaccaaaacggaaaaggtcaagatttatagtccccgaaactgcgaggagttgagg
attcctttcaagaccgacaagacagcgaaggttgtgggtaagctggcgtcaataacgcca
ccgacgcgactcccaaccgatgacgactaccacctgcatccacagctcgtcactggtgtt
ctggtacagaacgacttcaagctatcactcatggcgcctgaggatctaagggagtatgca
ggcttgactactacgaccattgtgtgtcgacagaagatcatgttggccgcggcgggcgtc
gacctcatcaggtgggcgttggagagcacctttggcgccgttgatgagttgcccgagatg
cgccagcttcacaaagaggtccctaatggtgacgatatgatcctggacgcgaaggaggaa
gaggtcgtggacgaggaagtagagcggccagtcgcgggctacatcgtcatgggctccatc
aacgttcgctgctttggcagcggtgaggtcgagctggagtgggagggcaacacaatgaac
gacgggtttgcagatgcggtcatggccgtgctactgacggtcgagagcagccccgctgcc
gtgaagaaatctgcaagcaagcattcccactcgcacgccccccaagaggagtatgtgctg
ccgacacgcaacctgcacgcgcggctgagcccagaggagcggctcgagcggctattcatg
ttcctggaggcgcagttcggcgcagaccacgtctcacccatcaaggaccccaggctcccg
gtatcggatgacacgtcgggcgaggcggaaaacggggatgatgatggcggcaggcagcag
aggctggaggagaggcagcgtgccgagattgagcggctgcacaagatcggcatccctgtg
cccggcgtggccatcaagatcgatgacaagctgaacgccaaggtctggctggaggacctg
gaagtcgagtgtgccaacaaggcctttggagacagggtaagagttgtggtggagagggcc
gtcgaggtcacggctcctctctggggttga

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