Pyricularia oryzae: MGG_02417
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Entry
MGG_02417 CDS
T01027
Name
(RefSeq) ATP-dependent rRNA helicase spb-4
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
mgr
Pyricularia oryzae
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mgr03009
]
MGG_02417
Enzymes [BR:
mgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MGG_02417
Ribosome biogenesis [BR:
mgr03009
]
Eukaryotic type
Pre-60S particles
Helicases
MGG_02417
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
2681514
NCBI-ProteinID:
XP_003709203
UniProt:
G4MRG4
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All DBs
Position
1:1770206..1772800
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AA seq
636 aa
AA seq
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MAPEKAPQKFSRSWDALTPPLADFILEAVASMGFNELTPVQAATLPLFRGNKDVVVEAVT
GSGKTLAYLIPIIDKILRRDDVLKRHHVGAIIVSPTRELATQIHSVLSSLISFHAPSAEF
SSFLKGDEKRPDTIVPVLIPQLLVGGTVKVAQDLSTFLRLSPNILVGTPGRLSELLSSPY
VHTPQSSFEVLVLDEADRLLDQGFQKELQRILGFLPKQRRTGLFSASVSDAVGELVRAGL
RNPQRIAVTVKRLTDGGVIEDRKTPASLQMSYLSVPASQKWPALIQFLRKVEPTPLRTII
FVSSCFAVKYFHAVIASLLPKDVSLIPLHGKQEPQVREKCFDRFVGSSSPSILLTTDVAA
RGLDIPQVDVVFQFDPPSDPKTFVHRAGRAGRAGRRGLAVALLLPGREQDYVGFLEVRKT
PITPLTNPEIKVSDEEVKLFAAQVRKQATADREVFQLSQRAFVSWARSYIEHKATSIFRI
TDVDWLDTAQGWGLVTLPKMPELKGSGIDRSLGHGIDIESIPFKDKAKEKKRQEELAQAE
EDRKNGVLSAKAAALAAKRKNNEAWSGRQGQEDTRTERRERKQRKREAVKVSKMTDEEKA
EQKRLEDMIAEVRRRNQEAAALASKDGGDDGFEGFD
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagaaaaggcacctcagaagttttctcggtcatgggatgcgctcacgccgccc
ttggccgacttcatcctagaagcagtggcgtcgatgggattcaatgagctcacaccagta
caagccgcaacattaccactatttcgaggcaacaaggacgtagtggtcgaggctgtgacg
ggcagcggcaagaccttggcttatctcatccccatcattgacaaaattcttcggcgagac
gatgtcctcaaacgacatcatgtgggcgccatcattgtctctcctacacgagaactggcg
actcagattcacagcgttctatcatcattgatatccttccatgcaccttcagctgaattc
tcgtcattcctcaagggagatgagaaaaggcctgacacaatagttccagtactgatccca
cagctgcttgtcgggggcacggtaaaggttgcacaagacttgtcaactttcctccgcctt
agtccaaacatcctggttggcactcccggcagactgtccgagcttctttcttctccatat
gtgcacactccacagtcgtcctttgaggttctggtcctcgacgaggctgatcgcctgctc
gaccaaggattccagaaagagctgcaacgcatcttgggcttcttgcctaagcagaggaga
accgggctgttcagtgcgagcgtctcggatgccgtcggcgagcttgtgcgtgccgggttg
cgaaatccgcagcgcattgccgtcactgtcaagcggcttacggatggcggtgttatcgaa
gacaggaagacacccgcaagcctgcaaatgtcatatctctcagtacctgccagtcagaaa
tggccggcgttaattcagttcctcagaaaggtagagccgacaccgttgagaacaataata
ttcgtgtcgtcatgttttgctgtaaaatattttcatgctgtcatcgcatcactacttccc
aaggacgtttcattaattcctttgcatggaaagcaagaacctcaagtgagggaaaaatgc
tttgaccgatttgtggggtcctcgagtccatcgatcctcctcactacagacgtcgccgca
cgaggtctcgatattccacaagtcgatgttgtctttcagtttgacccaccgtcagatccc
aagacattcgtgcacagagctggtcgagcagggcgagcaggacgtaggggcctcgcggtg
gccctgcttcttcctggccgcgagcaggactacgtcggtttcttggaggttcgcaagaca
cccatcacgccgcttaccaacccggaaatcaaggtttcagatgaagaagtaaaattgttt
gctgcccaggtccgaaaacaagcgaccgcggatagagaagtgtttcaactatctcaaagg
gcgtttgtgtcatgggccaggagttatattgagcacaaggccacaagtatattcagaatc
accgacgttgactggctcgatacggctcaaggatggggcctagtgacattgccaaagatg
cctgagcttaagggttccggtatagaccgtagtctgggtcacggtatagatatcgaaagc
attccgttcaaggacaaggccaaggagaagaagcggcaggaggagttggctcaggcagag
gaggacaggaaaaacggcgtactcagcgccaaggctgctgcgctcgccgccaagaggaaa
aataacgaggcctggagtggaaggcaaggacaagaagataccaggacagaacgcagggaa
aggaagcagcgcaagagggaggctgttaaagtgtccaagatgaccgacgaggaaaaggcg
gagcagaagagactggaggacatgattgccgaggttaggaggaggaatcaggaagcagcg
gcattagcgagtaaagacgggggtgatgatggatttgaaggctttgattag
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