KEGG   Pyricularia oryzae: MGG_02806
Entry
MGG_02806         CDS       T01027                                 
Name
(RefSeq) ATP-dependent RNA helicase SUB2
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
mgr  Pyricularia oryzae
Pathway
mgr03013  Nucleocytoplasmic transport
mgr03015  mRNA surveillance pathway
mgr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mgr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MGG_02806
  09122 Translation
   03013 Nucleocytoplasmic transport
    MGG_02806
   03015 mRNA surveillance pathway
    MGG_02806
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mgr03019]
    MGG_02806
   03041 Spliceosome [BR:mgr03041]
    MGG_02806
Enzymes [BR:mgr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     MGG_02806
Messenger RNA biogenesis [BR:mgr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     MGG_02806
Spliceosome [BR:mgr03041]
 Complex C
  Other components
   EJC/TREX
    MGG_02806
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    MGG_02806
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 DUF4844 CMS1 Dark_CARD
Other DBs
NCBI-GeneID: 2682359
NCBI-ProteinID: XP_003720935
UniProt: A4RBS3
LinkDB
Position
7:1448657..1451687
AA seq 436 aa
MSAEEDLIDYSDEELNTNETAAPAADSNGKKGELAAGGNVDKKGSYVGIHSTGFRDFLLK
PELLRAIGDCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGE
CSVLVMCHTRELAFQIRNEYNRFSKYMPDIKTGVFFGGTPIQKDAELLKNKETHPHIIVG
TPGRLNALVRDKFLRLSSVRIFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSATL
SDEIKPICKKFMQNPTEHYVDEDTKLTLHGLQQYFVALEEKEKNRKLNELLDDLQFNQVI
IFVKSTLRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGI
DIERINLAINYDMPADADSYLHRVGRAGRFGTKGLAVSFVTNDQDKEVLTAIEKRFEVPI
PEFPKDGIDASTYMAS
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgtctgccgaagaagatctcatcgactactccgatgaggagctcaacaccaacgagacc
gccgccccggccgcggactcgaacggaaagaagggcgagctcgctgccggcggaaacgtc
gacaagaagggcagttatgtcggcatccactcgaccggcttccgcgacttcctgctgaag
ccggagctcctccgcgcgatcggtgactgcggtttcgagcacccctcggaggtccaacag
acatgtattcctcaagccatgttgggaggagatatcatctgccaagccaagtccggtctc
ggaaagacggccgttttcgttctcaccaccctccagcaggtcgagcctgtggctggggag
tgctccgtcctcgtcatgtgccacactcgtgaattggctttccagattcgtaacgagtac
aaccgtttctccaagtacatgcctgacatcaagactggagtgttctttggcggtacccca
atccagaaggatgctgagttgctgaagaacaaggagacgcaccctcacatcattgtcgga
acaccaggacgacttaacgcgcttgtccgtgacaagttcctgcgccttagcagcgtgcgc
atctttgtcctcgatgagtgtgacaagatgctcgatcagattgacatgcgccgtgacgtg
caggagatcttccgtgctacgccccagcagaagcaggttatgatgttctctgccactctc
tcggatgagatcaagccgatttgcaagaagttcatgcagaacccgacagagcactacgtc
gacgaggacaccaagttgacgctgcacggtctgcagcaatactttgttgctcttgaggag
aaggagaagaacaggaagctcaacgagcttctggatgatttgcaattcaaccaagtcatc
atcttcgtcaagagcaccctgcgtgccaccgagcttgacaagcttcttcgcgagtgcaac
ttcccttcgattgctgtacactctggtgtcagccaggaagagcgtatccgccggtacaag
gagttcaaggaattcaacaagcgtatctgcgtagccaccgacgtgttcggccgtggtatc
gatatcgagcgtatcaacctggccatcaactacgatatgcctgctgacgctgactcatac
cttcatcgtgtcggtcgtgctggtcgtttcggtaccaagggtctcgccgtctcttttgtg
accaacgaccaagacaaggaggtcctgactgctatcgagaagcgctttgaagttcccatt
cctgagtttcccaaggacggtattgacgcaagcacctacatggcttcgtaa

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