Pyricularia oryzae: MGG_06063
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Entry
MGG_06063 CDS
T01027
Name
(RefSeq) nonsense-mediated mRNA decay factor
KO
K14327
regulator of nonsense transcripts 2
Organism
mgr
Pyricularia oryzae
Pathway
mgr03013
Nucleocytoplasmic transport
mgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MGG_06063
03015 mRNA surveillance pathway
MGG_06063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgr03019
]
MGG_06063
Messenger RNA biogenesis [BR:
mgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MGG_06063
mRNA cycle factors
P-body specific factors
MGG_06063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
DUF6291
Motif
Other DBs
NCBI-GeneID:
2684246
NCBI-ProteinID:
XP_003711916
UniProt:
G4N551
LinkDB
All DBs
Position
3:2436700..2442729
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AA seq
1125 aa
AA seq
DB search
MDRARKRELRALNDRAWTGEKSLIAINSSLDSSLRKNTSFMKRLRTAISAANLNTFIQEI
KTLSLHKYLSEIISACYEGLCRLKTPSEIEAGVEILSALHQRFGPDEFTQHLGWLLGRGM
ATPEKSYLKTLPPETREKEERERLVRQRVLIRVVTELWLVGVLRTLDDTTRPDDGTKGVP
GKPQETKARTSIKGGGAEPFPLEVLKDLLGHDREHVNLPLLVTFVKSFSWDVFGIKAAGA
DGRKTVEEDGATKTANGGTDLDHQELHDHGGTGDDEPLTPAELQERFRNVLKRYFDDVKA
HLERDQKAISNQSRRNAEAYVKSGEVFEDRQANFDKQVKAQERLVSNAQVLADMLGAEMP
DLKDDTDPMANANASIGLVRTGEYLRGQGEGAGIWEDEEERRFYENLVDLKGKVPAILLE
DAKKKKAETDEQVGKRVDTPETTDIAKAAESADDQSTAIANKTTGAQVDAILLRLPDMIT
KDNVDQTAIDFCFLNSKASRNRLVKALTDVPKGRSDLLPFWARLVATLGQHMPDIPKGVV
EYLDAEFRSLQRRKDKDFLSQVRLSNIRYLAELTKFNIVPEHVVFHCLKVSLEDFSKMNI
EVICNLLENCGRYLLRNPETSPRMMSFLDTLQRKKSVQHIGQAEKMLIENAVYYVNPPER
PAIEQKERTPMELFVRKLVYVDLSKRNYSKVLKQIRRLHWEEKEVVAILTKVFTKPGRVK
YGNIYLLAILLGAICKYHVVFTVTVIDTLVESITFGLEQNEFKFNQRRIAEAKYLGELYN
YRMFDHSVIFDTMYKILTFGHGGPPVPGRINPFDLSDDFFRIRLIATILETCGMFFNKGV
QGKKLDYFLSFFQYYIFTKEPLPMDIEFIVQDTYALTRPQWKLATNLEEASRAFQMAIAQ
DQKNSGLDKVLEQDDGTSGPSSDDGEGDGDDLNIADVDDDEDVESDEDDDHDGSHVDSDS
EDEAIVVTREEEEVNPEDEAEFEREYAKMMAESLDSRKFDRKPLFDVPLPMRTKNQVGEG
PVTNAPGTMAFSLLTKRGNRQQTRTVELPSDSNFAIAMKNQQAAEREEQQRIKNLVLNLD
LGENETEDGNDNKPTSYHHNHGNRQGRDRNAQRGRKLQLSDVDWT
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgcaaggaagcgcgaactgcgcgccctgaacgatcgagcttggactggcgag
aaaagcctcatcgccatcaactcgtccctcgactcgtcgctgcgcaaaaacacgtcgttc
atgaagcgtttgcgaaccgccatatccgccgcgaacctcaacacgtttatccaagagatc
aagacgcttagcttgcacaagtacctgtccgagatcatatcggcttgctacgaaggtctc
tgtcgtctcaagacgccgtccgaaattgaagccggagtcgaaattttgagcgctctccac
caacgtttcggacctgatgagttcacacaacacctggggtggttgctcggcaggggaatg
gcaacgccggaaaagagttatttgaaaacattgccgcctgagactagagagaaggaggag
cgggaacggctggtgcgccagcgcgtgctcataagggtggttacagagctctggcttgtc
ggcgtcctacggaccctcgatgacacaacccggcctgacgacggtacaaagggtgttccc
ggaaaaccccaagaaaccaaggcccgcaccagcatcaagggaggtggtgctgagccgttc
cctcttgaagttttgaaagacctccttggacatgaccgagagcacgtcaacctgcccctg
ctggttacctttgtcaaatctttcagctgggatgtgttcggcattaaggctgcaggcgca
gatggtcggaagacggtggaggaagatggggctactaagacggcgaacggcggcaccgat
ctggatcaccaggagctgcatgaccatggcgggactggcgatgatgaaccccttacgccc
gcggagctgcaggagcgcttcagaaatgtgttgaaaagatactttgacgatgtcaaggca
catttggaacgcgaccaaaaggcaatctctaaccagtctcgcaggaacgcagaagcctat
gtcaaatccggcgaggtctttgaagaccgccaagccaactttgacaagcaagtcaaagcg
caggagaggcttgtgtcaaatgctcaggtgcttgccgatatgctaggagctgaaatgcca
gatttgaaggatgacactgatccaatggccaacgccaacgcctctattggtttggtgagg
actggcgaatatctccgtggccaaggagaaggtgcagggatctgggaagacgaggaggag
cgacgcttctacgaaaacctggtagatctgaaaggcaaggtacctgccatccttcttgag
gatgccaaaaagaagaaggccgagaccgatgaacaggtgggcaaacgagttgatacacct
gaaactaccgatatcgccaaggctgccgaatctgcagatgatcaatctactgctatcgca
aacaaaaccactggagctcaggttgatgccatcctgttgcggcttccagacatgattaca
aaggacaacgtcgaccaaacggcaatagacttttgcttcctaaactccaaggcatcccgc
aaccggctggtcaaagccctcaccgatgtccccaagggccgcagcgatctgcttcctttt
tgggccaggttggtggccactctggggcagcacatgccagatatacccaagggtgttgtc
gagtatctcgatgcggagtttcgcagcctgcagcgtcgcaaggacaaagacttcttgagc
caggttcggctgagcaatattcgctacttggccgagcttacaaaattcaacatagtgcct
gaacatgttgtgtttcactgcctgaaggttagcttggaggacttctccaagatgaacatc
gaggtcatctgtaacctgttggaaaactgtggtcgctaccttcttagaaatcccgagacc
tcaccccgtatgatgtcgtttctggacaccctacaacgcaagaagtcggtccaacacata
ggacaggccgagaaaatgctcatagagaacgccgtatactacgtcaaccccccggagcga
cctgctattgagcagaaggagcgaacacccatggagttgttcgtcaggaagctcgtctat
gtggacctttcgaaacgcaactacagcaaggtcctgaagcagattcgaagacttcactgg
gaggagaaagaagtcgtggccatactgacaaaagtgttcaccaaacctggtagggtgaaa
tacggaaacatttacctccttgccattctgctaggggccatttgcaagtatcacgtcgtc
tttacagtcacggttattgacaccctcgtcgagtctatcacctttgggttggaacaaaac
gagttcaaattcaatcagcgtcgaatcgccgaggccaagtacctgggagagctgtacaac
taccgaatgtttgatcattccgtcatctttgacaccatgtacaagatccttacatttggt
cacggcgggccgccggttccgggacgcatcaacccttttgatctctcggatgatttcttc
agaattcggctgattgcaacaatcctcgaaacgtgtggcatgttcttcaacaagggtgtc
caggggaagaagctcgattatttcctctcgtttttccaatattacatcttcacaaaagaa
cctttgcccatggacattgaattcatcgtacaagacacatatgctcttacacgtcctcaa
tggaagttggccaccaacctggaagaggcttcaagggcatttcaaatggccatcgcccag
gaccagaagaactctggtctcgacaaggttcttgagcaagacgacggcactagtggtccg
tcttcagacgatggagagggtgatggcgatgatctcaacatcgccgatgtcgacgacgac
gaagatgtggaatctgacgaggacgatgaccacgacggatcgcacgtggacagtgactcg
gaggatgaggcaattgtcgtcacaagggaggaagaggaagtcaatccggaggacgaggct
gagtttgagcgcgaatacgccaagatgatggctgagagcctggattcgagaaagtttgat
aggaaacccctgttcgacgtcccgctcccgatgcgcactaagaaccaggtcggcgaaggt
cctgttaccaatgcgccaggaactatggcattctcgcttctgaccaagagaggcaacaga
cagcagactcggaccgtggagctcccgtccgactcgaactttgccatcgccatgaaaaac
cagcaggcagcggagcgagaagagcagcagcgtatcaaaaacctggtgctgaacctggac
ctaggagaaaacgagacagaagatggaaacgacaacaagcccacgtcatatcatcacaat
catggcaacagacagggccgggaccgcaatgcacaacgcggccgtaaactccaactgagt
gacgttgattggacttaa
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