Pyricularia oryzae: MGG_06334
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Entry
MGG_06334 CDS
T01027
Name
(RefSeq) VTS1
KO
K27407
RNA-binding protein VTS1
Organism
mgr
Pyricularia oryzae
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgr03019
]
MGG_06334
04131 Membrane trafficking [BR:
mgr04131
]
MGG_06334
Messenger RNA biogenesis [BR:
mgr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
MGG_06334
Membrane trafficking [BR:
mgr04131
]
SNARE
SNARE associated proteins
Others
MGG_06334
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
SAM_Ribosomal_mS41
Motif
Other DBs
NCBI-GeneID:
2684489
NCBI-ProteinID:
XP_003717248
UniProt:
G4N7X5
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All DBs
Position
4:complement(4120421..4124157)
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AA seq
619 aa
AA seq
DB search
MSAAQSTATNRMSTPEASNTHAASNRMSTPEASNVSSLRPPSSRAVGSGSHLRASADVAA
LTGSAARGGNARPSSDFYHGQGNSEIDPQDKLAQQWIADIDQYETTLEEMAAATLDQDFK
DELSAIEQWFRVLSEAERTAALYALLQQTTQVQIRFFIQVLQQMGKNHPMSGVLSPANFD
KDPMSNRLSDAMNKLSVDSARNSIARGPASQGAKRQSGLDPSTINMMFPDAAAAIATEKA
KFTQQTGNQPPSNRNSTAVDNRNSLVGASEGNDANGQHPTSPWGTGDAAARAKPAPGQAP
MGQFAAPSIGAGLRSPRPGQLGGNAQIQNTTLTASDKPGGELGVASPFGGPSGGNWASMV
NTPMAANFPQQQGGQADMLANATAMKLAAMSTVNNRFALDDVRKYRRTRSNDNSGQNPLS
PGMISPNVVMVDEHGRVLSRDQLLNMQGMQSQQQMSFNNRSRPNSPGIALQQAAGFGGMA
FASPQSNNFMLGNALNPMSGGLAPVGMGQFGMGGLAPEGYLSDHSDMNRGRSPRGRRGSS
KPPEDPTDPTLLQDIPAWLRSLRLHKYTDNLKDMRWVDLIELDDKQLEERGVNALGARRK
MLKVFEQVKEAKTEGRLST
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgctcagtccaccgccaccaacaggatgagcactcccgaggcctccaacact
cacgccgccagcaaccgaatgagcactccagaggcttccaacgtatcttctttgcgtcct
ccgtcgtcccgagccgtcggttccggctcccacctccgtgcatccgccgatgtcgctgca
ttgaccggctcggccgcgcgtggcggcaacgcccgcccgtcctcggacttttatcacggc
caaggaaactctgagattgatccgcaagacaagcttgcccagcagtggatcgctgatatt
gatcagtatgagactactctggaagagatggccgctgccacactggatcaggacttcaag
gacgaactcagtgccatcgagcaatggttcagggtgcttagcgaggccgagcggactgct
gcgctttatgcattgctgcagcagacgactcaggtccagatccgtttcttcatccaggtc
ttgcaacagatgggaaagaaccaccccatgtcaggagttttgtcacccgccaactttgat
aaggatcccatgtcaaaccgtctcagcgacgccatgaacaaactgagcgtcgactctgct
cgcaactcgattgcacggggccccgcgtcacagggtgccaaacgccagtcaggccttgac
ccttcgaccatcaacatgatgttccccgatgccgccgccgccattgcgacggagaaggcc
aagtttacccagcagacaggaaaccagcctccctcgaaccgtaacagcaccgctgtcgac
aatcgcaactccctggttggtgcctccgagggtaacgatgccaacggtcagcatcccacc
tctccttggggcactggcgatgcggcggctcgggccaaacccgctccgggccaggctccc
atgggccagtttgctgcaccctctattggtgctggcttgcgctctccccgccccggtcag
ctaggtggcaacgcgcagatccagaacacaaccctgaccgcttctgacaagcctggcggt
gagcttggcgtcgcttcccccttcggtggacctagcggcggtaactgggcctctatggtc
aatacgccgatggcagcgaacttcccgcagcagcagggtggccaggcagacatgctcgca
aatgccactgccatgaagttggccgccatgtcgacggttaataaccggtttgccttggac
gacgtgcgcaagtaccgccggacccgctccaacgacaactcgggacagaaccctctatcg
ccgggtatgatctcccccaacgtcgttatggttgacgagcacggcagggtcctgagccgt
gatcagctcttgaatatgcaagggatgcagagtcagcagcaaatgtcctttaacaaccgc
tcgcgccccaactccccgggaattgctctgcagcaggccgctggctttggaggcatggcc
ttcgcgtctcctcagagcaacaacttcatgcttggcaacgccctgaaccccatgagcggt
ggtcttgccccggtcggcatgggtcaatttggcatgggtggcttggcgccggaaggctac
ctttctgaccactcagacatgaaccgcggacgttctccccgtggtcgtaggggaagctcg
aagcctccggaagaccctaccgatcctaccctgctccaggacattcctgcttggcttcgc
agcctgcgtctacacaagtacactgacaacctcaaggacatgcgctgggtcgatctcatc
gagcttgatgacaagcagcttgaggagcggggtgtcaatgcactgggagctcgccggaag
atgttgaaggtctttgagcaagtcaaggaagccaagactgagggacgtctatctacttaa
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