Pyricularia oryzae: MGG_06400
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Entry
MGG_06400 CDS
T01027
Name
(RefSeq) nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
mgr
Pyricularia oryzae
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgr03019
]
MGG_06400
03041 Spliceosome [BR:
mgr03041
]
MGG_06400
Messenger RNA biogenesis [BR:
mgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
MGG_06400
Spliceosome [BR:
mgr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
MGG_06400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Nup35_RRM_2
RRM_7
RRM_8
Cas_Cas2CT1978
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
2684555
NCBI-ProteinID:
XP_003717170
UniProt:
G4N7J4
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All DBs
Position
4:3862385..3866191
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AA seq
479 aa
AA seq
DB search
MTDNGAPAPGTQLPPPPQANAGAPGFDNPQNGQSGPMAPPPLHIPQNTNPIPTAITSPMG
GGDQSALMSPGGTFTRRTAPEPNKRALYVGGLDARVTEDVLRQIFETTGHVQNVKIIPDK
NAKGYNYGFVEYDDPGAADRAMQTLNGRRVHQSEIRVNWAYQAATSATKEDTSNHFHIFV
GDLSNEVNDEVLTQAFSVFGSVSEARVMWDMKTGRSRGYGFVAFRDRSDAEKALSSMDGE
WLGSRAIRCNWANQKGQPSIAQQQAMSAVGMTPTTPFGHHHFPTHGMQSYEMVVNQTPAY
QTTCYVGNLTPYTTANDVVPLFQNFGYVVESRFQADRGFAFIKMDSHENAAQAICGLNGY
NVNGRPLKCSWGKDKNSTNPQGNFDPSQAFSPQSAGGPGFPGTPSTYFPQYGGQFSGPQG
NFGPNSAQSPAGFQQPMPFSNPPSAGGYGRGQQAPNAQWSSPQGQPQNFNNNGFSGYQG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaacggagctcctgccccgggcactcagctgcctcccccgccccaggccaat
gctggtgcgccgggcttcgacaacccgcagaacggtcaatccggtcccatggcccctccg
cctctgcacattccccagaacaccaacccgatcccgaccgccattacatcgcccatggga
ggtggggaccagagtgctctgatgtctccgggtggtaccttcacccgacgcactgcgcct
gagcctaacaagcgcgcgctctacgtcggtggcctggacgctcgggtcactgaggacgtg
ctgcgccagatctttgagacgaccggccatgtgcagaacgtcaagatcatcccggacaag
aacgccaagggctacaactacggtttcgtcgagtatgatgaccctggagcggctgatcgt
gccatgcagaccttgaacggcaggagagttcaccagtctgaaatccgagtcaattgggcc
taccaggccgccaccagcgcaaccaaggaggacacgtccaaccacttccatatcttcgtc
ggtgatctctccaatgaggtcaatgacgaagtccttacgcaggccttctccgtatttggc
tctgtgtccgaggcgcgtgtgatgtgggacatgaaaaccggccgatcccgtggttatggc
ttcgtcgcattccgcgaccgctccgatgccgagaaggcactcagctccatggatggcgag
tggctcggttcccgtgccatccgctgcaactgggcaaaccagaagggtcaaccctcgatt
gcgcagcagcaggccatgtcggccgtgggaatgacccccacgacgccgttcggtcaccac
cactttcccactcacggaatgcagagctacgagatggttgtcaaccagacgcccgcctac
cagaccacctgctacgtcggaaacctcaccccgtacaccaccgccaatgacgtggttccg
ttgttccagaactttggctacgtggttgagtctcgattccaagcggatcgtggtttcgct
ttcatcaagatggatagccacgagaacgccgctcaggccatctgcggcctcaacgggtac
aacgtgaacggacggcctctcaagtgcagctggggtaaagataagaactcgaccaaccct
cagggcaacttcgacccttcgcaagccttcagccctcagagtgccggaggccctggcttc
cctggaactccctcgacctacttcccgcagtacggcggccaattcagcggcccccagggc
aactttggccccaactcggcgcagtctcccgcaggcttccaacagcctatgccattcagc
aacccgcccagcgcaggcggctatggtcgcggacagcaggcaccaaatgctcagtggtcg
tcaccgcagggccagcctcagaacttcaacaacaacggcttctcgggctaccaaggctaa
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