Pyricularia oryzae: MGG_06457
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Entry
MGG_06457 CDS
T01027
Name
(RefSeq) pre-mRNA-splicing factor RSE1
KO
K12830
splicing factor 3B subunit 3
Organism
mgr
Pyricularia oryzae
Pathway
mgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MGG_06457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgr03021
]
MGG_06457
03041 Spliceosome [BR:
mgr03041
]
MGG_06457
03036 Chromosome and associated proteins [BR:
mgr03036
]
MGG_06457
Transcription machinery [BR:
mgr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
MGG_06457
Spliceosome [BR:
mgr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
MGG_06457
Complex B
MGG_06457
Complex C
U2 SnRNP specific factors
MGG_06457
Chromosome and associated proteins [BR:
mgr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
MGG_06457
TFTC complex
MGG_06457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
2684612
NCBI-ProteinID:
XP_003717109
UniProt:
Q52E49
LinkDB
All DBs
Position
4:3667028..3671660
Genome browser
AA seq
1216 aa
AA seq
DB search
MATTSNMFLYSLSIQPPSTITRAILGQFSGTKEQQIVAASGSRLTLYRPDPTQGKVVPLM
SHDVFGIIRDLASFRLAGSSKDYLIIASDSGRITIVEYLPAQNRFSRIHLETFGKSGVRR
VVPGQYLAADPKGRACLIASVERCKLVYVLNRNSQAELTISSPLEAHKNGTLTLSLVALD
VGYSNPVFAALEVDYSEVDQDPKGDAAQNVETVLNYYELDLGLNHVVRKWFDVVDSTASM
LFQVPGGSDGPSGVLVCGEENITYRHSNQDAFRVPIPRRKGATEDPSRKRNIVSGVMHKL
KGSAGAFFFLLQTEDGDLFKVTIDMVEDAEGNPTGEVRRLKIKYFDTIPVSNNLCILKSG
FLFVASEFGNHLFYQFEKLGDDDEELEFFSSDFPVDPKEPYEPVYFYPRPTENLALVESI
DSMNPLMDLKVANLTEEDAPQIYTVSGKGARSTFRMLKHGLEVNEIVASQLPGTPSAVWT
TKLRRDDEYDAYIVLSFTNGTLVLSIGETVEEVSDTGFLSSVPTLAVQQLGDDGLVQVHP
KGIRHIRNGVVNEWSSPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKKE
MFGTVTSLSLGEVPEGRLRSSYLAVGCDDCTVRILSLDPESTLESKSVQALTAAPSALSI
MSMEDSSSGGTTLYLHIGLNSGVYLRTVLDEVTGELTDTRQKFLGPKAVRLFQVSVQKRT
CVLALSSRSWLGFSDPVTKGFTMTPLNYEELEWGWNFVSEQCEEGMVGVNGQFLRIFAIE
KLGDNVIQKSIPLTYTPRKLAKHPTQRIFYTIEADNNTLAPELREQLMAAPTAVNGDARV
LPPDEFGYPRGNGRWASCISVVDPLGDGEELEPGVVQRIDLDNNEAALSMAVVSFASQDG
ESFLVVGTGKDMVVNPRRFTEGYIHVYRFSEDGRELEFIHKTKVEEPPTALLPFQGRLVA
GIGRMLRIYDLGLRQLLRKAQAEVAPQLIVSLNTQGSRIIVGDVQHGLIYVAYKSETNRL
IPFADDTIARWTTCTTMVDYDSTAGADKFGNLWILRCPEKASQESDEPGSEVHLVHSRDY
LHGTSNRLALMAHVYTQDIPTSICKTNLVVGGQEVLLWGGFQGTIGVLIPFVSREDADFF
QSLEQHLRSEDPPLAGRDHLMYRGCYVPVKGVIDGDLCERYTMLPNDKKQMIAGELDRSV
REIERKISDIRTRSAF
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacatctaatatgttcctgtactctctgagtatccagcctccctctacaatt
acgagagctatcctcggccaattctcaggaaccaaggagcagcagattgtcgctgcatcg
ggctcgcggttaacactttatcgccccgatcctactcagggcaaggtcgtgccgcttatg
tcgcatgatgtctttggtatcatccgagatctggcctcgttccgcctggctggcagtagc
aaagattatttaatcattgcaagcgactctggtagaattaccattgtcgagtatttacca
gcacaaaaccggttctccaggatacatctcgagacttttggcaagtcaggagtccggcgt
gtagttccgggccagtacctagctgccgatccaaaaggtagagcatgcctgatagcttcg
gtagagcgctgcaagctggtctatgtgctcaaccgcaattcccaggccgagctgaccatc
tcatctccgctcgaggctcacaaaaatggcaccctcaccctctccctcgtggctcttgac
gttggctactcaaaccctgtcttcgccgccctcgaggttgactattctgaggttgaccaa
gatccaaagggtgacgcggcccagaacgtggaaaccgttttaaactactacgagctggat
cttggactaaatcacgtcgtgcgaaagtggtttgacgtcgtcgattccaccgctagcatg
ctattccaagtaccaggagggagcgatggccccagtggagtcctggtgtgtggcgaagaa
aacatcacatataggcactccaaccaagatgccttccgtgttccaataccaagacgcaag
ggcgccaccgaagaccccagcaggaaacgcaacatcgtctctggtgtaatgcacaaactc
aagggaagcgctggcgcctttttcttcctgttgcagaccgaagacggagatctattcaaa
gtcacaatcgatatggtggaagacgcagaaggcaatccgactggggaagtgaggcgactc
aagattaaatactttgacaccatccccgtgtccaacaacctttgcatcctgaagagcggt
tttctctttgttgccagcgaatttggcaaccatcttttctaccaattcgagaaactcggc
gacgatgacgaagagcttgagtttttcagcagcgatttcccagttgaccccaaggaaccc
tatgagcccgtttacttttaccccagacccacagaaaacctggctcttgtcgagagcatt
gactcaatgaatcctttgatggatctcaaggttgccaacctgaccgaggaagatgcgcct
cagatatacacggtcagcggcaagggagcccgcagtacctttcgtatgctcaagcatggc
ttggaggtcaacgagattgttgcatcacagctaccaggaacgccttcagcggtatggact
accaagctgcgtcgagatgacgagtatgatgcgtacatagtcctatccttcacaaatggc
acactggtgttgagcatcggtgagacggtcgaggaggtcagcgacaccggctttctgtca
tccgtcccgaccctggctgttcagcagttgggcgacgacgggcttgtacaagtacacccc
aaaggaatccgtcacattcgcaacggcgtcgtaaacgagtggtcatccccacaacaccgc
tctatagtggccgcggcgaccaacgaaaggcaggtcgctgttgcgttgagcagtggtgaa
attgtctacttcgagatggacacagacggctccctggcggagtacgacgagaagaaggag
atgtttggtactgttaccagtttgagtttgggcgaggttcccgaagggcgtcttcgaagc
tcatacctggctgttggttgtgatgactgtacagtgagaattctgagccttgacccagag
tcgactctggagagcaagtcagtgcaggcactcacggcagccccgtctgctctgtcaata
atgtcgatggaggactcatcttctggcggcacaacactatatcttcatatcggtctgaat
tctggtgtctaccttcgcacagtgttagacgaagtgacaggagaactcacagacacgcgg
caaaagttcctggggccgaaggccgtaagactattccaagtctccgtacagaaaagaact
tgtgtgcttgctctcagttcaaggtcatggcttggattctccgacccggtcaccaagggg
ttcaccatgacccctcttaactacgaagagcttgagtggggatggaacttcgtcagcgag
cagtgcgaggagggcatggtcggcgtcaacggccagtttcttcgaatctttgcaatcgag
aaacttggagacaacgtcattcaaaagtctattccattgacgtacacgccacggaaactg
gctaaacaccccactcaacgcatattctacaccatcgaggcagacaacaacaccttggca
cccgaactccgagagcaactgatggcggcgcccacggctgttaacggggatgccagggta
cttcccccagatgaatttggatatcctcgtggaaatggccgttgggcatcctgcattagt
gtggttgatccgctgggtgacggagaagagctggagcctggggttgtgcagaggattgat
cttgacaacaacgaggcggcattgagcatggctgtcgtgtcttttgcgtctcaggatggc
gagagcttccttgtggtcggcactggcaaggacatggttgtcaacccacgacgcttcacc
gaaggttacatccacgtttaccggttctcggaagatggacgtgagctagagttcatccac
aagactaaagtcgaagagccgccaacagctctcctgccttttcagggaaggcttgttgcc
ggtattggtcgtatgctgaggatatatgacctcggtctgcggcagttgcttcgaaaggca
caggcagaagtggctccacagctcatcgtatctttgaacacccaaggcagccgaatcatt
gtcggcgatgtgcagcatggcttgatctatgtcgcctacaagagcgagaccaacaggctt
attccatttgctgacgacaccatcgcaagatggacaacctgcacgaccatggtcgactac
gactccacagcgggcgcggacaagtttggtaacctctggatcttgcgatgtcccgaaaag
gctagccaagagtcggacgaaccaggctccgaggtgcatcttgttcacagtagggactac
ctccacggcacatccaaccgcctggctctcatggcccacgtttacacacaagacatacct
acgagcatctgcaagacaaacttggtggtgggtggacaggaagtactgctttggggcggc
ttccagggtactatcggcgtgttgatacctttcgtcagtcgcgaggatgccgacttcttc
caaagtctcgaacaacaccttaggagtgaagatccgccgctggcagggagagatcatctt
atgtacagaggctgttacgtgcctgtcaagggcgttatcgatggcgatctctgtgaaagg
tacactatgttgcctaacgacaagaaacagatgattgccggtgaactcgatcgctcagtg
agagagatcgagcgcaagatttcagatattcgtacccgttctgctttctaa
DBGET
integrated database retrieval system