Pyricularia oryzae: MGG_06683
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Entry
MGG_06683 CDS
T01027
Name
(RefSeq) hypothetical protein
KO
K12589
exosome complex component RRP42
Organism
mgr
Pyricularia oryzae
Pathway
mgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MGG_06683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgr03019
]
MGG_06683
Messenger RNA biogenesis [BR:
mgr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MGG_06683
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
MGG_06683
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
2684856
NCBI-ProteinID:
XP_003709390
UniProt:
G4MKT8
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All DBs
Position
1:2382373..2384360
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AA seq
468 aa
AA seq
DB search
MNRGATKNLAHVPIIPAAFGTKRQQNTCLGRFISTQATKKKAKGGRAPERSIATRGFIIN
KATPNPRNDRQNHTIMASSSQGVLLSPAELAYLHDSLSLTPPIRPDGRTATQFRPLTAET
GILPGTNGSARICFADGTEAIVGVKAEVEKTRLAYNHGEEGAKLVAATAAAANDDEDGAE
YGQRAGRSEWVELSVEIPGLRDDDANTIFLSEMLSEALLADGEFAKKLWINSRFHWKLFL
DIILISPPLSYPLPLLSLTTHLALLATRLPRLKSEGDEDPLFDDDWDVSPFLYSRQKTAE
SAASSRPPVTLLVTAVGDNIVFDPSKEELAVADVAIAISITEAAVTAANSLDDMDVDSGA
VKPLSIGARNLRLLSIRVIDPPSRLTPSGAADDTAVDTAVANTIAAPALAPQKQTEGRNT
DTEAVEGVWKPPRGGTKLAVMNAIVQKVLEKGGVADEVLDALKAVELS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggggagctaccaaaaatcttgcccacgtcccgattatacctgcagcttttgga
acgaagaggcagcaaaatacctgtttaggccgatttataagcacgcaagcaacgaaaaaa
aaagccaagggcggaagagcgcccgaaaggtcgattgctacaaggggatttataatcaat
aaagccacaccaaacccgcggaacgaccgacagaaccacaccatcatggcatcctcctcc
cagggcgtcctactgtcgcccgccgagctcgcatatctccacgactccctctccctgacg
cctccgatccggccagatggcaggaccgcgacgcagttccgtcccttgaccgccgagact
ggcatcctgccgggaaccaacggcagcgcgcgcatctgctttgccgacggcaccgaggcc
atagtcggcgtcaaggctgaggtcgagaagacgcgtctggcttacaaccatggggaggag
ggtgcaaagctggttgcggccacggcggcagcggccaacgatgacgaggacggggcagag
tatgggcaaagagcgggacggtcagagtgggtggagctttcggtcgagatccccggcctg
agagacgacgacgccaacaccatcttcctttcggaaatgttgagcgaggctctgctggcc
gacggagaatttgcgaagaagctttggatcaacagcaggtttcactggaagctgttcttg
gacattatactgatatctccgccgctatcctaccctctacctttgctgtcccttactacg
caccttgcactgctggctacaaggctaccacgcctcaaatctgaaggcgacgaggaccct
cttttcgatgacgattgggacgtctcgccgttcctgtactcacgccaaaagacagccgag
agtgctgcaagctctcggccgccagtcacgcttctagtgactgctgttggcgacaacatc
gtattcgacccatccaaggaggagcttgcagtggcagacgtagccatcgccatttcaatc
accgaggcagcagtgacggcagcgaattctctggacgatatggacgtcgactcaggggcg
gtgaagcccttgagcattggagcccggaatctccgcctgctttccatccgcgtcatcgac
cctccttcaaggttgacgccctccggagcagcagatgatacagctgtagacaccgctgtc
gccaacacgattgccgcgcctgctttggcgccccaaaagcaaacagagggccggaataca
gatactgaagcagtggagggtgtctggaaaccgccaagaggaggaacaaagttggccgtc
atgaatgctattgtacaaaaggtgctagagaagggaggtgtggctgatgaagtcttggac
gccctcaaggctgtagagctgtcatga
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