KEGG   Pyricularia oryzae: MGG_08100
Entry
MGG_08100         CDS       T01027                                 
Name
(RefSeq) exosome component 2
  KO
K03679  exosome complex component RRP4
Organism
mgr  Pyricularia oryzae
Pathway
mgr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mgr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MGG_08100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mgr03019]
    MGG_08100
Messenger RNA biogenesis [BR:mgr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     MGG_08100
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     MGG_08100
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 RRP40_S1 ECR1_N_2
Other DBs
NCBI-GeneID: 2678345
NCBI-ProteinID: XP_003715055
UniProt: G4MYB3
LinkDB
Position
2:5698147..5699691
AA seq 361 aa
MPITISAPRAATRSQRIPSSRMDDSDSDSDSDAGAQLAMAGGEGDIVTPGQVITEDPQWM
RGHGTYTFPASPAIMSSVAGTVSRTNKLLSVRPMRARYTPEVGDLVVGRIVEVQARRWKV
DVGGVQLAALPLSAINLPGGILRKRTETDELQIRSFFAEGDLLVAEVQQLFGDGGASLHT
RSLRYGKLRNGVFAAVSGTGGGGVVRARRQVWTMEIASTGTSATWQDKQQKAASSQAPPS
IDVVLGVNGYVWISKHVEDPTEGDGSANATGTGISNMEEAVSAKMYSSQNAPIDPVTMRE
IVRVRGVITALVENGVRVDEDMVERAYREAVEMARASEGGEDDIYLGGERGAQLAAVLTG
R
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgcccatcacaatatcagcaccaagggcggcgacccgaagtcaaagaatcccgtcttcc
aggatggatgactcggactcggactcggattcagacgctggcgcacagcttgccatggcc
ggcggcgagggagacattgtgacgccagggcaggtcatcactgaggatccacaatggatg
cgcggccacggcacgtacaccttcccggcatcgccagccatcatgtcgtcggtggcaggc
accgtgagccggaccaacaagctcctctcagtgcggccgatgcgagcgcgctacacgccc
gaggtgggcgacctcgtcgtgggccggatagtcgaggtgcaagctcgccggtggaaggtc
gacgtgggcggggtgcagctcgccgccctgccgctgtccgccatcaacttgcccggtggc
atcctgcgcaagcgcaccgagacggatgagctgcagatccgctccttcttcgccgagggc
gacctgctcgtcgccgaggtccagcagctgtttggcgatggcggcgcctcgctgcacacc
cgctccctgcgctacgggaagctgcgcaacggagtctttgccgccgtgtctggcaccggt
ggcggcggcgtagtgcgtgccaggcgtcaggtctggaccatggaaatcgcctcgaccggc
acctcggcaacctggcaggacaagcagcaaaaggcggcatcgtcgcaggcgccccctagc
atcgatgttgtgctcggcgtcaacggctacgtatggatcagcaagcacgtcgaggacccc
accgagggcgacggctccgccaacgccaccggcaccggcatcagcaacatggaggaggcc
gtgtcggcaaaaatgtactctagccagaatgcccccatcgaccccgtcaccatgcgcgag
attgtccgcgtgcgaggtgtcattaccgcactcgtggagaacggtgttcgcgtggacgag
gatatggtggagcgcgcgtatcgcgaggctgtcgaaatggcccgggcctcagagggtggt
gaggatgacatctacttgggtggagagcgcggcgctcagctggctgctgtcctgactggg
aggtag

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