Pyricularia oryzae: MGG_08573
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Entry
MGG_08573 CDS
T01027
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
mgr
Pyricularia oryzae
Pathway
mgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MGG_08573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgr03021
]
MGG_08573
03019 Messenger RNA biogenesis [BR:
mgr03019
]
MGG_08573
Transcription machinery [BR:
mgr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
MGG_08573
Messenger RNA biogenesis [BR:
mgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
MGG_08573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
Pcf11_C
Pfc11_Clp1_ID
zf_PCFS4
VHS
Motif
Other DBs
NCBI-GeneID:
2678715
NCBI-ProteinID:
XP_003716097
UniProt:
G4N654
LinkDB
All DBs
Position
4:complement(720946..724804)
Genome browser
AA seq
695 aa
AA seq
DB search
MSEEDHAAGVAEDYKDALEGLTSNARVEISNLTLIARENTESAHAIAEVLVDHIKQIHPP
RKLPALYLLDSIVKNVGTPYTLFFGRKLYQTFMEAYASVDNATRRKMDEMLKTWKEPVPG
SLDTRPVFPPEVVRPIENALIKARTSALQAQQEQMRSQHHLLGGRGRPPPPMMAQGMPYR
ETPTPPGARGPNGYGQSYPPPNGRGPENSQFPTPQPHHPQGMPILSHSVPQPPPSAPAQL
PFSPPAQAPTPDGISIEALSNDVLQLIAATRAEIARNPYDTSQKPMLDALLALQLLLQAG
NLPRDQLVVVKSRIDELSARARGAAAAQPAPTYTPPIVVPPIAPPASAPPPATAGTPLSL
DALLGQGALAALLARTPQPAVVVPPLPFAPPVATPSASLAALRSPPPQATPAVPPPTDAS
ALLAALRSKGILSAGPLPPVVAPTPVSHAPGLPSVIAPPVAPAHVEIMGDIQLTTSSLKQ
PRLYLVNTLYDDLGKPCTQCGRRFRNDEAGRAAKTAHMDWHFRVAARIAEAEKKGQHRSY
YVDVRDWVGSREAVDMDGHAAQSQQSQQQNQNKQQHQYQDQGGPEATGSRSSRGGNGTGG
KRWIPVPDAGSNVNSVCPICQERFELKWLDEAQEWVWMDAVRPGGGNRVFHASCHSEVTG
RGATLTPPVGMVLGKRKADDAYAGRKIKKYDDLAY
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaggaccatgctgccggcgtggcagaggattacaaagatgcgcttgaaggc
ttaacatccaacgcgcgcgttgagattagcaacctaactctcattgctcgcgagaacacc
gagtctgcccatgctattgccgaggttctcgttgaccatatcaaacaaatccatcctccg
cgcaagctgccagccctgtacctgctcgactccatcgtcaagaatgtggggactccatac
acgcttttctttggccggaagctctatcagaccttcatggaggcctatgcatcggtcgat
aacgccacgcgccgcaagatggatgagatgctcaagacgtggaaggagcccgtgccgggt
tccctggacacgcgccccgtcttcccacccgaggttgtgcgtccgatagaaaatgccctc
atcaaggcgaggacgtcggcgcttcaggcacagcaggagcagatgcgcagccagcaccac
ctgctcggaggccgtggcaggccgccaccgccaatgatggcccagggcatgccatacagg
gagactccaacaccaccaggcgccaggggtccaaacggctatgggcagtcatatccaccg
ccgaacgggaggggcccagaaaattcacagtttccaacaccgcagcctcatcacccacaa
gggatgccgatattatcacactcagtgccccaaccaccaccatccgcacccgcacaactt
cccttttcaccaccagcgcaggcacctacacccgacgggataagcatagaagccttgagt
aatgatgttttgcagctcatagctgccacgcgcgcggaaatcgcccgcaacccgtatgat
acttcccagaagcccatgcttgatgccctgctggcgcttcagctactgcttcaggcggga
aacctgccgagggaccaactggtggtcgttaagagccgaattgatgaactgtccgcaaga
gcacgcggagccgcagccgctcaaccagcaccaacctacaccccgcccatagtcgtgcct
cccatagcgccgccggcatccgcaccacctcccgccaccgccggcacgcccctctcgtta
gatgccttgctcggccagggcgcactcgccgccttgttggctagaaccccgcagccggcc
gtagtagtgccaccactgccgtttgcaccccccgttgcgacgccgtcagcgagccttgcc
gcgcttcgctcgccgccgccacaggcaacccctgccgtcccaccgccgacagatgcatcg
gctcttttggccgccctgcgcagcaagggcatattatcagcaggacctttgccgcctgtc
gttgcaccgacgccagtgtcgcacgctccgggactaccgagcgtgattgcgcctccggtg
gcgcctgctcacgtcgagatcatgggcgatatacaactgacgacgagttcactgaagcaa
cctcgcttatatcttgtcaacaccctctacgacgacctcggcaagccgtgcacgcagtgc
gggcggcgattccgcaacgacgaggccggccgggcagccaagacggcccacatggactgg
cacttccgggtggcggcgcgaatcgccgaagcggagaagaagggccagcaccgcagctac
tacgtcgacgtgcgggactgggtcggatcgcgcgaggcggtcgacatggacgggcacgcg
gcgcagtctcaacagtcccaacagcaaaatcaaaataaacaacagcaccagtaccaagat
caaggaggacccgaggcgaccggctccaggagcagcaggggtgggaatggcaccggcggc
aagaggtggatccccgtgccagacgcgggcagcaacgtcaactcggtctgtcccatctgt
caagagcgtttcgagctcaagtggctggacgaggcgcaggagtgggtctggatggacgcg
gttcggcccggcggcggaaatagagtgttccacgccagctgccacagcgaggtcacgggg
cggggggcgacgctgacgccgccggtggggatggttttggggaagaggaaagcagatgat
gcttatgctggacgcaaaatcaaaaagtacgacgacctggcgtattga
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