Pyricularia oryzae: MGG_08693
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Entry
MGG_08693 CDS
T01027
Name
(RefSeq) topoisomerase II
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
mgr
Pyricularia oryzae
Pathway
mgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MGG_08693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgr03019
]
MGG_08693
Messenger RNA biogenesis [BR:
mgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MGG_08693
mRNA degradation factors
5'-3' decay
Decapping complex
MGG_08693
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Peripla_BP_2
Motif
Other DBs
NCBI-GeneID:
2678887
NCBI-ProteinID:
XP_003719288
UniProt:
G4NFW4
LinkDB
All DBs
Position
6:complement(440949..444648)
Genome browser
AA seq
826 aa
AA seq
DB search
MSFFGFDTSGHNKGAPGFSQAHDPFAGLGQDSSGEALDFDDTYDGLGDQLDETDDAFNDD
TFGGGDSTDKKVGKDFDFFGQTAKVANAIDEEHMRYNRSQPTQRPAQPIPEYQYSMQQQS
APRPVRSGYEKYKESEPVPDMQVDAALWGVAPKKQASQAPAPIPVASASRKMMSLEEVEA
SMRAQSSQPSEFAAPGSYPGHGQLAHQGFLPQQGADYLYAQQQQVRHVPSPTAHLQHGQG
QPSLAILQRPQSRSPADSMPHGLPQGLAPQQQRHAQAHRQPSPQGPSTKPMQILQNPNRH
PGDNVRLGSQPNHQGHRQQNSFSQTGILTHPSQLSQLSDEEKNAYLEAEARRAKRNHKIF
MLSKDNGLMTPQDKNFITRIQLQQLVAATGNPMDQGADDHIAEDFYYQVHSQIRGGHRQH
PGQPLNNFAQTYLYQTGSRQAGARRHNRGPENHVQRMEQQVQRAVEAAKSKPKNKQLVIE
GSLGKISFSNAKTPKPLLNIKRTDSASDANRPGSSHKAPSHSAIINRKTVLSDIEKVYET
LMRMEDHDRKMPPPNDSSDPELVRVQMEWQQGAAQLNNQLWTNLKVHEPIGATAIHPFIA
FLSYPKGKKALPRVFRHISYEQRCTILTMIVVHLDKIDVVRDAATDAGETLLNAALRENI
ELFSVAVMSTLFNFMNELNLDIVTGVLGIISGLSVDTIARTRIGASMLTMILSRAEILKQ
GGAPQQLIEQWNNTYNNFFTLLEPTLPRIFPGSVNSGQDIYVWQLLAALGIGANQDQQQR
LVLGVKDRVMDTVALSKTLPQDMAQARLQNVNLFMRSIGLDVELLV
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcttcggcttcgacacgtcgggccacaacaaaggcgcccccgggttctcgcaa
gcccacgacccgttcgccggccttggtcaggactcaagtggtgaagcgctcgatttcgat
gatacttatgacgggcttggagaccaactggatgagacggacgatgcgttcaacgatgac
acctttggtggaggtgactccactgacaagaaggtgggaaaggactttgatttcttcggc
cagaccgccaaagtcgccaacgccatcgatgaggaacacatgaggtacaatcgcagccag
cctactcagagacctgcgcagcccatccccgagtaccagtattccatgcagcagcagtcc
gccccacggccagttcgctcaggctatgagaagtacaaggagtcggagccagttcccgac
atgcaggttgacgctgcgctctggggcgtggcgcccaagaagcaagcatctcaggcgcct
gctcctattcctgttgcaagtgctagtcgcaagatgatgagcctggaggaagttgaggct
tctatgcgagctcaatcaagccagccgtcagagtttgctgcaccaggatcttacccaggt
catggccagcttgcccaccaaggctttctccctcagcagggcgccgactatctgtacgct
caacagcaacaggttcgccatgtgccttcccccaccgcgcatctccaacatggtcaaggg
cagccgtcgttggcgatccttcaaagaccgcagtccaggtcgccagccgattccatgccg
catggtcttccccaaggccttgcgccccaacagcaacgccatgctcaagcccaccgtcag
ccctctcctcagggcccatcgaccaagcctatgcagatccttcagaaccccaatcgtcat
cctggagataatgtgaggcttggttcccagccaaaccaccaagggcatagacaacaaaac
tctttctcgcagactggtattcttacgcacccctcgcagctgtcccagctcagcgacgaa
gagaagaatgcgtatctggaggctgaggcacgccgagcaaagcgaaaccacaagatcttc
atgctttccaaggacaacggtttgatgactccccaggacaagaacttcatcacgagaatc
cagctgcaacaactggttgctgctaccggtaatcccatggatcaaggagcagatgaccac
atcgcagaggatttctactaccaggttcacagtcaaattcgcggtggacaccgtcagcat
cccgggcagcctctcaacaactttgcgcagacctacttgtaccagacaggcagccgtcaa
gctggtgcgcgccgacacaaccgcgggcccgaaaaccacgttcagcggatggagcagcag
gttcagcgagccgtggaagcggccaagagcaagcccaagaacaagcagctcgtcatcgag
ggtagtctgggaaagatatccttcagcaatgccaaaacgccaaagcctttactcaacatc
aaacgtaccgatagcgcctctgacgcaaatcgccctggtagctcgcataaagcaccttca
cattcggcaatcatcaaccggaagacggttttgagtgatattgagaaggtttacgaaaca
ttgatgaggatggaggaccacgaccgcaagatgccgcctcccaatgattcgtcggatcct
gagctcgttcgggttcaaatggagtggcagcagggtgcagctcagctgaacaatcagctt
tggaccaacctcaaggttcacgagcccattggagccacagcaatccacccctttattgcg
tttctctcataccccaagggcaagaaggctttacctcgcgtattccgccacatttcgtac
gagcagcggtgcaccattttgaccatgatcgttgttcacttggacaagattgatgttgtt
cgtgacgccgcaacagacgctggcgagacgcttttgaatgcagctctgcgcgagaacatt
gagctattttccgtcgctgtgatgagcactctgttcaacttcatgaatgagctcaacctg
gacatcgtaacgggcgttcttggtattatctcaggtctcagcgtggatactattgcgcgt
accaggattggtgcttccatgctcactatgatccttagccgagccgaaattctcaagcaa
ggcggagctccccaacaacttatcgagcaatggaacaacacgtacaacaatttcttcacg
cttctggaacctactttgccacgaatcttccctggctccgtgaactcgggccaggacatt
tacgtctggcagctccttgccgcccttggcattggagcaaaccaagaccagcagcagcgg
cttgtgctgggcgtcaaggaccgtgtcatggataccgttgcgctgtccaagacgctgcca
caggacatggctcaagcccgacttcaaaatgttaatcttttcatgcgttcaatcggtctg
gacgtcgagttgctggtttga
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integrated database retrieval system