Pyricularia oryzae: MGG_11351
Help
Entry
MGG_11351 CDS
T01027
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
mgr
Pyricularia oryzae
Pathway
mgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MGG_11351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mgr03041
]
MGG_11351
Enzymes [BR:
mgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MGG_11351
Spliceosome [BR:
mgr03041
]
Complex C
Other components
Step II factors
MGG_11351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
ResIII
SLFN-g3_helicase
nSTAND3
T2SSE
ATPase
SRP54
Flavi_DEAD
AAA_30
Microtub_bd
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
5051310
NCBI-ProteinID:
XP_003713740
UniProt:
G4MTU4
LinkDB
All DBs
Position
2:1454111..1457721
Genome browser
AA seq
999 aa
AA seq
DB search
MSDRDSNPKRRRLEFNPLRSDDRYSSLPTRESGRNFKEPPRRFQFNRERRDGGGSGSGVT
TPRARDDASPQAEVPEEDETALDRDWYAGDETGHTFGDEYHNPFAAYADDSLAEKEQIEK
KTGRFDRMSARAQQKQRDIDAWETNRMLTSGVAQRRDLGADFEDDEEATRIHLLVHDLKP
PFLDGRTVFTKQLEPVPAVRDNQSDMAVFSRKGSRVVKERRQQRERQKQAQDATNMAGTA
LGNLMGIKGEEDGDSALPVPDDQAPAEVKAEKSDNKFSEHMKKNDGASNFSQTKSIREQR
EFLPAFAVREDLMRVIRDNQVIIVVGETGSGKTTQLTQFLYEDGYGQLGMIGCTQPRRVA
AMSVAKRVSEEMEVKLGGTVGYAIRFEDCTSKDTVIKYMTDGVLLRESLNEPDLDRYSCI
IMDEAHERALNTDVLMGLFKKILQRRRDLKLIVTSATMNAKRFSDFFGGAPDFTIPGRTF
PVDVMFSRSPVEDYVDQAVQQVLNIHVSMGTGDILVFMTGQEDIEVTCELVRERLDALND
PPKLSILPIYSQMPADLQAKIFDRAPPGVRKCIVATNIAETSLTVDGIMYVVDAGYSKLK
VYNPKMGMDTLQITPISQANASQRSGRAGRTGPGKAFRLFTEKAFKDELYIQTIPEIQRT
NLSNTILLIKSLGVKDMLDFDFMDPPPQDTMTTSLFDLWALGALDNLGDMTDLGRKMNFF
PMDPPLAKLIIMAEEYGCTEEMITIVSMLSVPNVFYRPKERQEESDAAREKFFVPESDHL
TFLHVYSQWKANGHSDAWCSRHFLHSKSLRRAKEVRDQLLDIMKTQKMDIVSCGTDWDVV
RRCICSGYYHQAAKVKGIGEYINLRTSVTVQLHPTSALYGLGFLPDYVVYHELILTSKEY
MSTVTSVDPMWLADLGGVFYSVKEKGYSARDKRVVETEFNRKMEIEAQMAEDKRRDEEQK
KADADKANGKVKSSVDGAGKKFVTKGSVRKPVMKKRGRP
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcgagacagtaaccccaaaaggcgacgcctcgaatttaacccattgcgctct
gacgaccgctacagctcgctgccaacccgagaaagcggtcgaaacttcaaggaaccgccg
cgacggttccagtttaaccgcgaaaggagagatggcggcggatcaggctctggcgtgacg
acgcctcgtgcccgggatgacgcttcaccgcaagcggaagttcccgaagaggatgagacc
gcgctggaccgtgactggtatgctggcgacgagactggtcatacgtttggcgacgagtac
cacaacccgttcgcagcgtatgccgatgacagcctggccgaaaaggaacagattgagaag
aagacaggtcgtttcgaccggatgagcgcccgggcacaacaaaagcagagggatattgat
gcatgggagaccaatcgtatgctcacgtcgggtgtcgctcagaggcgggatctgggagcc
gactttgaggatgatgaagaggccacccgcatacatctccttgtgcatgatttgaagcct
ccttttttggacggccgcaccgtattcaccaagcaactcgagcctgtgcccgcagtcagg
gataatcagagcgacatggctgtgttcagtcggaagggtagcagggtggtaaaggaaagg
agacagcagagagagcgccagaagcaggcgcaggatgcaacgaacatggctgggaccgcg
ctgggaaacttgatgggcatcaagggagaggaagatggcgacagtgcgctcccggtacct
gatgaccaagcccctgccgaagtcaaggccgagaaatcggataacaagttcagcgagcac
atgaagaaaaacgacggagccagcaacttcagtcaaaccaaatcaatcagggaacagcgt
gaatttctacccgcatttgcggttcgggaagatttgatgcgggtaattcgggacaaccag
gtgatcatcgtggtcggcgagactggttctggcaagaccacacagctcactcagtttctg
tatgaggatgggtacggtcaactcggcatgataggttgcacccagccaaggcgagttgct
gcaatgagcgtagccaagcgtgtaagcgaagaaatggaggtcaaacttggcgggacggtc
ggctatgcaatccgtttcgaggattgcacaagcaaagacaccgtcatcaagtatatgacc
gatggtgttctcttgcgcgaatctctgaacgaaccggaccttgaccggtactcatgtatc
atcatggacgaggcacacgaacgtgcactgaacaccgacgttttgatgggcttgttcaag
aaaatattgcaaaggaggagagacctgaagctcatcgtgacatctgcaacgatgaacgca
aaacgcttttccgactttttcggtggcgcgccggatttcaccattcccggaagaacattc
cccgttgatgtcatgttttctcggtcgcccgtggaggactacgttgatcaggctgtccag
caagttctcaatatccatgtctccatgggaactggcgatatccttgtgttcatgacagga
caggaggatatcgaggtgacgtgcgagctggttcgagagcgtttggatgcgctgaatgac
cctcccaagctcagcattctacccatatacagtcaaatgccagctgatttacaggccaag
atctttgacagagcaccgcctggtgtccgcaaatgcatcgttgccacaaatattgcagaa
acgagtttgacagttgacggtatcatgtacgtggtcgacgccggttattcgaagctcaag
gtttacaaccccaaaatgggcatggatacccttcaaatcaccccgatttcccaagcgaac
gcctcacaaagatccggacgcgctggaagaacaggcccgggcaaagcctttaggctgttt
acggagaaagcattcaaagatgagctttatatacagaccatacccgagattcagcgcacg
aatcttagcaacaccatactactcattaaatcactcggtgtaaaagatatgctggacttc
gacttcatggatccgccgcctcaggacacgatgacgacatcactctttgacctttgggca
ctcggggctctagataaccttggagacatgacggatctcggccgcaagatgaacttcttt
ccgatggatccccctttggcaaagttaatcattatggcggaggagtacggctgtaccgag
gaaatgatcacaatcgtgtcgatgctttcagtgcccaacgtcttttaccggcccaaggag
cggcaggaagagtcggacgcagcgcgagaaaagttctttgtgccagagtcggatcaccta
acgttcttgcatgtgtactcgcagtggaaggcaaatggtcactctgacgcgtggtgcagt
cggcacttcctgcattccaaatcgctcaggagagccaaggaggtgcgagaccagcttctt
gacattatgaagacccaaaagatggacattgtgagttgcgggacagactgggacgttgtg
cgcaggtgcatctgctctggatactaccaccaggctgcgaaggtgaagggtatcggcgag
tacatcaacctgcggaccagcgtgacagtccagcttcacccgaccagtgcgctttacggt
ctcggctttctgcccgactatgtcgtctaccacgaactcatccttacctccaaggagtac
atgtcaaccgtgacttcagtcgaccccatgtggcttgctgacctaggtggtgtcttctac
tctgtcaaggaaaagggatactctgcacgggacaagcgtgtggtggagaccgagttcaac
cgcaagatggagattgaggcacaaatggccgaggacaagcgcagggatgaggaacagaaa
aaggccgatgcggacaaagcaaacggcaaagtcaagtcaagtgtcgatggggctgggaag
aagtttgtcaccaagggttctgtaaggaagcctgttatgaagaagcgtgggcgtccatag
DBGET
integrated database retrieval system
