Pyricularia oryzae: MGG_11387
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Entry
MGG_11387 CDS
T01027
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
mgr
Pyricularia oryzae
Pathway
mgr03440
Homologous recombination
mgr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MGG_11387
03450 Non-homologous end-joining
MGG_11387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgr03032
]
MGG_11387
03400 DNA repair and recombination proteins [BR:
mgr03400
]
MGG_11387
DNA replication proteins [BR:
mgr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
MGG_11387
DNA repair and recombination proteins [BR:
mgr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
MGG_11387
BRCA1-C complex
MGG_11387
NHEJ (non-homologous end-joining)
MRX complex
MGG_11387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
SbcC_Walker_B
AAA_21
DUF745
AAA_29
ABC_tran
AAA_13
AAA_16
Roc
AAA_22
Motif
Other DBs
NCBI-GeneID:
5051344
NCBI-ProteinID:
XP_003713570
UniProt:
G4MSF1
LinkDB
All DBs
Position
2:complement(897689..902472)
Genome browser
AA seq
1316 aa
AA seq
DB search
MSKIEKLGVRGIRSFGPTNAQFVTFNTPLTLIVGENGSGKTTIIECLKYATTGEQPPNSK
GGAFLHDPKLAGESVIKAQVKLSFYSTIGQQLVVTRSLQVTQAKKKLNVKTIDGTLRVET
NGEHVSLSKKNAELDEMVPEKMGVPAAILENVIFCHQDDSLWPLSEPSVLKKKFDELFEA
IKYTKAIDNLKLLRKKHGEQLRIFKNLEETSKQDKEKGERYGKAIKVLEAEIAELEKKYK
TTLDKMDKYRKEEATKRQEANSFFGIVTDLQNKKVLYEERKQMADELLETIERMSDSEEE
LEAALSQYADKVKQMKDDATGKTAKYTELKGDLGALRKSLQDKLADRGKHVADKEHHDRQ
VSARLSMVKEAAQQHGIRGFDGDLTEAQVKSFENRVQKLLDEKKREVAVYDQELEKLKTS
HGKAVADLTARRESLNRARDSAQKRISDIDLRLKGLQRSVGDLHVDDGAKAVLDSNSTQL
ETELREAYNALQQSELDDEINEANDNLGRLQGEASRLNNELVQCTHLASERAQLDLRRKE
AENQNVYLKSVMATWGDKLAALAGGPVEPETIGKVYQQILDQQSAAVSAKKSLVDEAQQE
IRQLDYKVSSAREEVTKTTKDTERAEKAVCDALMQSKDEDDDVHPVHTYLDRLASLQESL
SVAETDLHLFDALAEYYEKAKKKMERDNKCTLCERSFGDSDKFFKSKLVQKIVKNLDQTQ
KEVVNADIQRLRKQVDILRAVRTNYDTYQRTKAQLPPLEEKLQDLESEKEAMIRKQETLD
KEMSALEDKRLDTESMGKAVRSITDAVAKIADSEKQIERLASQQSSSGNIRSAHEIQEAQ
VKNSEQTRALSLQLNKLVADRQRKKDLISQLELNKSELQRKLSEFNQKVERKNDLIKQIE
SLKTERDQMQETKDEGAKELEDLEQNLFKAESIRDEEVGRAREKLQKATEQKNLVAETVG
KLKSLSSDIQDYLDRGGPGLAAANDRTIKNLEQSLERMESDITKLTAEINNLRQEADNSD
RKKKNIQDNLAYNRTLRIVDKLEKEIEALEDRNAQEDWERLDGEANMLKMKFDDLSGKSH
VLKGTLETKKAEQASRVAEYQQDYSDARLKFREAHIKVETTKAAIEDMGSYSAALEKAIM
SYHSLKMEEVNRIADELWRSTYQGTDIDTILIRSEVETSATASTTRRTYNYRLCMVKQDT
EMDMRGRCSAGQKVLASIIIRLALAESFGVSCGLIALDEPTTNLDEANIRSLAVSLHNII
QARQAQSNFQLIVITHDEAFLRAMQCSDFCDTFYRVRRDEMQRSTISRENISVLMD
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaatcgagaagctgggagttagaggaatccgatcctttggccctaccaatgcg
caatttgtcacctttaatacacctctcacacttatcgttggtgaaaatggatcaggcaag
acaaccatcattgaatgcctcaagtatgccacaaccggcgagcagccgccaaacagcaag
ggcggtgcatttttgcatgatcctaagctggctggcgaatccgtaatcaaggcccaggtc
aagctatccttctactctacaataggccaacagctcgtggtaacccggagcttgcaggta
acccaggcaaagaagaagctaaacgtcaaaacaatcgacggcactctgcgagttgagaca
aatggcgaacatgtcagcctgtccaagaaaaacgccgaactggacgagatggtacctgag
aagatgggtgtgccagcagcaatcctcgagaacgtgatcttctgccatcaagacgactca
ttatggccccttagcgagccctcggtcctcaaaaagaagtttgatgagcttttcgaggca
ataaagtacaccaaggcgatagataatttgaagctattgcggaaaaaacacggcgagcag
cttcgaattttcaaaaacctagaagaaacctcgaagcaagacaaggagaagggcgagcga
tacggaaaagcgatcaaggtccttgaggccgagattgcagaactggaaaagaagtacaag
acgacgttggataagatggacaaataccgcaaagaagaggcgacaaagcgacaggaggca
aacagcttcttcggcatcgtgaccgatctacaaaacaaaaaggttctctatgaggagcga
aagcaaatggccgatgagctattggaaaccatagagcgaatgtctgattccgaagaagaa
cttgaagcagcactttctcagtatgcagacaaggtcaagcagatgaaggatgatgcgact
ggaaagacggcaaagtatacggaactaaaaggagatcttggggcactgcgaaaatctttg
caggacaagcttgcagatcgtggaaagcatgtcgctgataaggagcatcatgaccgtcaa
gtatcggctcggctcagcatggtcaaggaggctgctcagcaacacggcatccgggggttt
gatggagatttgacagaggctcaggtgaaaagctttgagaaccgtgtccagaagcttctc
gacgagaaaaagcgcgaagtagcggtatatgaccaggagcttgagaaactcaagacctca
catggaaaggccgttgctgatctcactgctcgtcgggaatctctgaacagagcgcgcgat
tcagcccagaagcgaatctctgacattgacttgcgcctcaagggcctgcaacgttctgtt
ggcgatctacatgtagatgatggagcgaaagctgttttagattctaactcaacacagctg
gaaaccgagcttcgcgaggcatacaacgccctgcagcaatcggagctggatgacgagatc
aatgaggcgaatgacaatttgggccgactccagggcgaggcctcgcgactgaacaacgag
cttgtacagtgcactcacttggcatccgagcgagctcagcttgacctccgcaggaaagaa
gcagaaaaccaaaacgtttatctaaaatcagtcatggcgacgtggggcgacaagttagcc
gctttagcaggaggtcctgtcgagcctgaaaccatcggcaaagtctatcaacaaattcta
gaccagcagagcgccgctgtttctgccaagaaaagcctcgtggacgaggcccagcaagag
atccgccagctcgattacaaggtatcctccgctcgtgaagaggtcacaaagactaccaag
gacacagagcgtgctgagaaggcggtttgcgatgccttgatgcagtctaaggatgaagac
gatgacgttcacccggtccatacctaccttgatcgactggcttccttgcaagagagcctg
agtgtcgcggagaccgatttgcatttgtttgatgcgctggcggagtattacgaaaaggca
aaaaagaagatggagcgcgataacaaatgcaccctatgcgagcgttcgtttggagattct
gacaagttcttcaaatcaaagttggttcaaaaaattgtcaagaacctggaccagacccaa
aaggaagttgttaacgccgatatccagcgcttgaggaaacaagtggacatcctaagggca
gtgcgtacgaattatgacacttaccagaggacaaaggcacagctcccacccctggaggag
aagctccaggatttggagagtgaaaaagaagccatgatcagaaagcaagaaactttggat
aaagagatgagcgccctggaagacaagcgtcttgataccgaatctatggggaaggcagtc
cgtagcatcacggatgccgtggcaaaaattgccgattccgaaaagcagatcgagaggttg
gcatctcagcagagctccagtggcaacatccgcagtgcacatgagatccaggaagctcaa
gtgaagaactcggaacagacgagagctttaagcctccagttgaataagcttgtggcggat
cgtcaaaggaagaaagatttaatttcccagctggagctgaacaagagtgagctgcagcgc
aaattgtccgagttcaaccagaaggttgagcgaaagaacgatctcatcaagcagatagag
tctctgaagaccgaaagagaccaaatgcaggaaaccaaggacgaaggcgccaaggagctg
gaagatctagaacaaaacttgttcaaagcagaatcgatccgcgacgaggaggttggtcgc
gctcgagagaaactccagaaggctacagagcagaagaacctggttgcagaaaccgtggga
aaactgaagtctttgagcagcgatattcaagactacctggacagaggaggacccggtctg
gctgctgccaacgaccgtacaatcaagaaccttgagcagtcgcttgaaaggatggagagt
gacattacgaagcttacagccgagataaataatctacggcaagaagctgacaatagcgat
cgcaaaaagaagaatattcaggacaatctggcttataaccggactctgaggatcgtcgac
aagctagagaaggagattgaagctttggaggaccgaaacgcacaagaggattgggaacgt
cttgatggcgaggccaatatgctcaagatgaaattcgacgatctctctggcaaatctcat
gtgctcaagggtactctcgagaccaagaaagcagagcaagccagtcgagtggccgagtat
cagcaagactacagcgatgcacggctcaagtttcgcgaggctcacatcaaggtggagacg
accaaggcagccattgaggacatgggaagctacagcgccgctctagagaaggctatcatg
tcttaccacagcctcaagatggaggaggtgaaccgcattgcagacgagctgtggcggtcg
acataccagggtactgatattgacaccattctcattcggtccgaggtcgaaacgtcggcc
actgcctccacgacacgccggacctacaactaccgcctctgcatggtgaagcaagacacg
gaaatggacatgcgtggccgctgttcggcaggtcaaaaggtcctggcaagcatcatcatc
cgcctggcgctggccgagtcgtttggcgtcagctgtggcctgatcgccctggacgagcca
acgacaaatctcgacgaggccaacattcgcagcctcgccgtgtcgctgcacaacatcatc
caggcacgccaggcacagtcaaattttcagctcatcgtaatcacgcacgacgaggccttt
ctccgcgcgatgcagtgctccgatttctgcgacaccttttaccgtgtcaggagagatgag
atgcagcggagtactatttctcgcgagaatatctcagtcttgatggattga
DBGET
integrated database retrieval system
