Pyricularia oryzae: MGG_12164
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Entry
MGG_12164 CDS
T01027
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
mgr
Pyricularia oryzae
Pathway
mgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MGG_12164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgr03019
]
MGG_12164
Messenger RNA biogenesis [BR:
mgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MGG_12164
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
MGG_12164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
2677699
NCBI-ProteinID:
XP_003719658
UniProt:
G4NIN5
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All DBs
Position
6:1731237..1734903
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AA seq
481 aa
AA seq
DB search
MNRPGAVPPNHRGMPAGFGGQPKPPQQSARSASNRLPNGTMAGNGSGWAFAGVPMASGGL
QNPSRQLGGNVSFAQSLSGSQPATPLDLSEFPSLSGNSQLSNQSQSSMWSTGGARNLGGP
APIQRNQPTPLSQQQNQQEDMYTPPTRLPTDQGSFRFGNQASIGQTAQSQQNAVDDFPPL
NRNPNGEIGRERGGPSLMSSLGFAPPSGNGTTSAQQTSRAANGLLNALSANSRSTETRSP
ADARNEESPQKGLPSQKSSLDGLANQSEGRHPGTIGNSGLPGKAKAEEPVPSVPVQDPLA
GMPESDKWGIKGLRFLMNGFPDYNALVSGIDYTNMGLEQALRNPEPISEQIYSAFDDTPP
RPAIPKFRLPECYKVNNVQPIENKIQGFNEETLMWIFYSCPGDRQQQLAALELNNRNWRW
HKKLQVWLTKDEHMMPQVISPNHERGYYLVWDTTQWRKDRRELALDYADLDTNPLGLTLG
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaccaggcgcagtacctccaaatcatcgcgggatgccagcaggatttggtggc
caaccgaagccaccgcaacaatccgcacgatccgcttcgaatcggttacctaatggaaca
atggctggcaacggatcagggtgggcgtttgcaggtgtcccgatggcaagcggtggcctg
caaaacccttccaggcagctgggcggcaacgttagttttgcgcaaagcttaagcgggtcg
caaccagcgacacctctcgacctttctgaattcccctccctttccggtaactcgcaactt
tcgaatcaatcacaatcttcgatgtggtcgactggtggagcgaggaatctgggcggcccg
gctcctatacagcgcaaccagcctacgcctctatcccaacaacagaaccaacaagaagac
atgtacacgccgcccacacggctgccaactgaccaaggatcatttcgctttgggaaccag
gccagcattggccagacggcacaatcgcaacagaatgcggtcgatgatttccccccactt
aacaggaaccctaacggagagattggtcgtgagcgtggcggcccaagtctcatgtccagc
ctgggcttcgcccctcccagcggcaatggcacgacatctgcgcaacaaaccagcagagct
gccaacggtcttttgaatgctctttcagcaaacagcaggtccacggagactcgatctcca
gctgacgcaagaaatgaagaatccccgcagaagggactaccatcgcagaagtcatcgctg
gatggattggcaaaccaaagcgagggcaggcatccagggacgattggaaacagtggactc
ccgggcaaggccaaggctgaagagccggtgccgtctgtaccagtacaagatccactggca
ggaatgcccgagagtgacaagtggggtattaaagggctccggtttttgatgaatggattc
cccgactacaacgctttagtgtcgggtatcgactacaccaacatgggactggagcaggcc
ctgcgcaacccagagccgatatcagaacaaatttactcagcgtttgatgatacaccgccg
aggcccgcgattcctaagttccggttgccagagtgctacaaggtcaacaacgttcagcct
attgagaataagattcaaggcttcaacgaggagacattaatgtggatattctactcgtgt
ccgggagaccgtcaacagcaactggcggctcttgagctcaacaaccgcaactggcgatgg
cacaagaagttgcaagtatggttgaccaaggatgagcatatgatgcctcaagtgatcagc
ccaaaccacgaacgtggttactatctcgtttgggatacgacacaatggcgtaaagatagg
cgcgagctggcactcgattacgccgacttggacaccaaccctcttggccttacattgggt
tcataa
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