Pyricularia oryzae: MGG_15024
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Entry
MGG_15024 CDS
T01027
Name
(RefSeq) exosome complex exonuclease RRP43
KO
K12586
exosome complex component RRP43
Organism
mgr
Pyricularia oryzae
Pathway
mgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MGG_15024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgr03019
]
MGG_15024
Messenger RNA biogenesis [BR:
mgr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MGG_15024
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
12984895
NCBI-ProteinID:
XP_003721099
UniProt:
G5EI70
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All DBs
Position
7:complement(1949717..1951205)
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AA seq
357 aa
AA seq
DB search
MASAPTTSNTPTTFPRSTFAKLSPHPFLLANLAPTDNSHPPARTNGRAQTESRVVNVNTG
SLSHAQGSAVVRCGDTTVICGVRAEILPVASIPNYRALEDDAGTLAAGTERGRRELRDYD
LLVPNIELATGCAPQFLPGVPPSTLAQTLSSRVYSLLHASHLLSVDDLRIVHTPATRSSR
PDDGDEAMEEEEDDDDDGKKPETKAFWTLFIDVLFISFDGNPFDVAWTAVLAALRDTKLP
AAKWDEDREMVLCSRQAPAKPLGVSGFPVACTAAVVRRRRDDPDVAGDQYWVLVDPDRSE
EELCDEFVSVVVDSEGGDGTKILSLLKLGGTSAGMEFINRLVTLAEGRWKEIRGAMR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagccccgacaacatcaaacacaccgacgacctttccccggtcaaccttcgca
aagctctccccgcaccccttcctactcgccaacctcgccccgaccgacaactctcacccg
ccggcacgcacaaacggccgcgcccagaccgagagtcgcgtcgtcaacgtcaacacgggt
tcgctgtcgcacgcacagggtagcgccgtcgtccgctgcggcgacaccaccgtcatctgc
ggcgtcagggccgagatcctgcctgtggcttccatacccaactaccgcgccctcgaagat
gacgcaggcactctggcggcgggcaccgagaggggtcggagggagctcagggactacgac
ctgctggtcccaaacatagagctcgccaccggctgcgcgccgcagtttctgccgggcgtg
ccgccctctacgctcgcgcagacgctcagcagtcgcgtctactcgctgctgcacgcctcg
cacttgttgtcggtcgacgacctgcgcattgtgcacacgccagcgacgaggagcagcagg
cctgacgatggcgacgaggcaatggaggaggaggaggacgacgacgacgacggcaagaag
ccagagaccaaggcgttttggacgctcttcatcgacgtgctcttcatttcctttgacggc
aacccgttcgacgtggcctggacggccgtcctcgccgccctgcgggacacgaagcttccg
gccgccaagtgggatgaggacagggagatggtcttgtgctcgcgacaggcaccggccaag
ccgcttggcgtgagcgggtttccggtcgcgtgcacggcggccgtggtgcggcggcggcgc
gacgacccggacgtggccggcgatcagtactgggtgctggtggaccccgaccggtcggaa
gaggagctgtgcgacgagttcgtgtcggtagtcgtcgacagcgagggtggggacggtacc
aaaatcctcagcttgctcaagctcggaggcacctctgccgggatggagtttatcaaccgg
ctggttacactggcggaggggaggtggaaggagattaggggagctatgaggtga
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