Pyricularia oryzae: MGG_15042 Help Entry MGG_15042         CDS       T01027                                  Name (RefSeq) antiviral helicase SKI2   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism mgr  Pyricularia oryzae Pathway mgr03018   RNA degradation Brite KEGG Orthology (KO) [BR:mgr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     MGG_15042  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mgr03019]     MGG_15042 Enzymes [BR:mgr01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      MGG_15042 Messenger RNA biogenesis [BR:mgr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      MGG_15042   mRNA degradation factors    3'-5' decay     Ski complex      MGG_15042 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DSHCT Ski2_N DEAD MTR4_beta-barrel MTR4-like_stalk DEXQc_Suv3 ResIII Helicase_C AAA_22 Motif Other DBs NCBI-GeneID:  27922177 NCBI-ProteinID:  XP_016845995 UniProt:  A0A151V4I4 LinkDB All DBs Position Unknown AA seq 1305 aa AA seqDB search MADLGEAMSRLALGESGGDGSEPIDEILFQRQSPSKRRREESKDIRAKLERDYLTPSPTF STEWLGKLQQRWEAPVDYADLFAMAPTQSRTVVRFQRQGLEGRIVGYDTVTVPAASATAK NSTSMLRKPGNNADFVRGAAGFFPFAPGGLDSVEAAAALDEQLLRARGGGSASNTADGKS KLERIIPMGDKDGLLQVAPGLSRGIDLSLKKKSKVDEAEEIAVMDELGQEPEAPPSAEDE DAGIGAVASQKINGEGVEPGTPEGADEDEELDALLPVEFPALEPHGQLAVSSARNAGREW AHMVDVKRDFANFRELVPDMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAE YAIALAARHMTKAIYTSPIKALSNQKFRDFRQTFEEVGILTGDVQINPEASCLIMTTEIL RSMLYRGADMIRDVEFVIFDEVHYVNDYERGVVWEEVIIMLPDHVSLILLSATVPNTYEF ASWVGRTKKRDIYVISTPKRPVPLEHYLWGGKTIHKIVDSDKKFIEKGWKDANNAIQGKD KVKMPANAAAAGSAGNQRGGRGGRGGPQGQQRGGRGGPRGGGGGGRGGSGPPRASHAPGH MGRAGRQGGFTSRAQDQTLWVHLVNYLKKDTLLPACIFVFSKKRCEENADALKNQDFCTA NEKSAIHMTIERSIARLKPEDRVLPQIIRLRGLLSRGIAVHHGGLLPIVKEIVEILFAQT LVKVLFATETFAMGLNLPTRTVVFSGYRKHDGHSFRNLLPGEYTQMAGRAGRRGLDTVGS VIIVPPGGGDEAPPVAELNKMILGEPSKLRSQFRLTYNMILNLLRVEALKIEEMIKRSFS EHATQQLLPEHEKAVKLSEADLAKVKRDACKICDEDSCMDECHQAAQDYRQLTQELYAKL IAIPIGRKMFSPGRLVVYSKDGVRTAGVLLSEGASTKSGMNSLALHVCGIRNLRESRDNS DILPFIPGWGRYYTPLHAQANRRSVSHKTLHVPLSDVECLTGHITRGIVPEIFQGGDAHA GATKQLRQIASKWDAEWWVEADLSKLRNLQFQELVNKRKEAEIKATSSKALSCPQFLKHF AMCHDQWLIKENIQQLRQALSDQNLQLLPDYEQRIQVLRELNFIDQSSRIQLKGKVACEI HSGDELVLTELILDNVLADYEPAEIASLLSCFVFQERTDSEPALTARLQKGLETIVAISE KVNNVQTLHQVLQVGDESADFASRPRFGLMEVVYEWARGMSFKNITDLTPVLEGTIVRTI TRLDETCREVKNAARIIGDPELYQKMQAAQEMIKRDITAVASLYM NT seq 3918 nt NT seq  +upstreamnt  +downstreamnt atggctgacctcggggaggcaatgagccggctggctctcggggagagtggtggtgatggc tctgaaccaattgacgagattctcttccagcgacagtcgcctagcaagcgtcgcagagaa gaatccaaggacatacgcgccaagctcgaacgtgactacctcacaccatctccaacattc tctacagaatggctcggcaagctccagcagcgctgggaagctcccgtcgactacgccgac ctcttcgccatggcccccacccagtcgcgcaccgtcgttcgcttccagcgccagggcctc gaaggccgcattgtaggctacgacaccgtaaccgtgcccgctgctagcgcaaccgccaag aactcgacgtctatgctgcgcaagccgggtaacaatgccgattttgtcaggggtgctgcc ggcttcttcccctttgccccaggtggcctggacagtgtcgaagctgctgctgctctcgat gagcagttgctacgtgcacgtggcggcggcagtgcatctaacactgcagatggcaagagt aaactcgaacgcatcataccgatgggggacaaggatgggttgttgcaagtggccccgggt ttgtcaaggggcatagatttgagcctcaagaagaaaagcaaggtggacgaggccgaggaa atagccgtaatggacgagctcggtcaggagcccgaggcgccgcccagtgctgaggacgag gatgcggggattggcgcagttgcatctcaaaagatcaatggcgagggggtcgaacctggt acgcccgaaggcgccgacgaggatgaagagctggatgcactcctgccggtcgagttcccc gcccttgagccgcatggacagctggctgtatcctcggcgcgcaatgcagggcgagagtgg gcacacatggtggacgtcaagcgagattttgccaacttccgagaactggtacccgacatg gcccgcgagtggccatttgaactggataccttccagaaggaggcggtgtaccacctggag aacggtgatagtgtctttgtggcggcgcatacctccgctggcaagacggtagtcgccgag tatgccattgcactcgcggcgcgccacatgacaaaagctatctacaccagtcccatcaag gctttgagcaatcaaaagtttcgtgacttccgtcagacgtttgaggaggttgggattctg acgggtgacgttcagatcaaccctgaggcaagctgtctgatcatgactacggaaattctg cgcagtatgctttaccgtggtgccgacatgatccgtgacgtcgagtttgtcatattcgac gaggttcattacgtcaacgactatgagcgtggtgtagtctgggaagaggtcatcatcatg ctaccggaccatgtgtcgcttatcctgctctcggcaactgtcccaaacacttacgagttt gcctcctgggttgggaggacgaagaagcgagacatatacgtcatttcaacccccaaaaga ccagttccgctagaacactatctttggggtggaaagactattcacaaaattgtcgactca gacaagaagttcatcgaaaagggttggaaggatgctaacaatgccatccaaggcaaagat aaagtgaagatgccagccaatgctgctgccgcaggtagtgctgggaatcagcgcgggggt cgcggtggaagaggaggcccacagggtcagcagcgaggtggtcgtggcgggcccagaggc ggcggagggggtggcagaggtggcagtggtcccccacgagccagccacgcccctggtcat atgggaagagccgggcgacaaggtggattcacatccagagctcaagatcaaacgctttgg gtccacctggtaaactacctcaaaaaagacacgctactccctgcctgtatcttcgtcttc tccaagaagcggtgcgaagaaaatgcagacgcactgaaaaaccaggacttttgcactgcc aacgagaagagcgcgatacacatgaccattgaacgatctatcgcgcgtcttaaaccagag gatcgcgtacttccccagataatacggctgcgggggcttttgtctcgcgggattgctgtt catcacggtggtctgctgcccatcgtaaaggagatcgttgagatattgtttgcacagaca ctggtgaaggtgctttttgctaccgagacgttcgccatggggctgaatcttcccactcgc accgtcgtattctcaggataccgcaaacacgatggccattcgttccgaaatcttctcccc ggcgagtatacacagatggccggcagagcaggcaggcgaggactcgacaccgtcgggtcg gtcattatagtgccccccggtggaggtgatgaggcgccgcctgtggccgagctgaacaag atgatcctaggcgagccatcaaagctgcggtcacagttccgtttgacgtacaatatgata ctcaatctattgcgcgttgaagccctcaagatcgaggaaatgattaagcgtagtttctcc gaacacgcgacgcagcaacttctacccgagcacgagaaagccgtcaagctatcagaggca gaccttgcaaaggtcaagcgcgacgcatgcaagatctgcgacgaggatagctgtatggac gaatgccaccaggctgcgcaagactaccgtcagcttacccaagagctgtacgcaaagctc atcgccatcccgataggacgcaagatgttcagcccgggcagattggtcgtatactccaag gacggcgtgcgcaccgctggtgtcctgctctctgaaggggcgagcaccaagagcggcatg aacagcctagcactacacgtctgcggcatccgcaacttgcgtgagtcgcgcgacaacagc gacattctgccttttattcctggatggggtcgatactacactccgctacatgcgcaggcc aacaggcggagcgtctctcacaagacactccacgtgccgctttcagatgtagagtgtctc accgggcacataacaaggggcattgtacccgagattttccagggaggagatgcgcatgca ggagctaccaaacagctgaggcaaatcgcatccaagtgggatgccgagtggtgggttgag gcggatctgtccaaactacgaaacttgcagtttcaagagctcgtcaacaagcgcaaagag gcggagatcaaggctacaagttccaaggcattaagctgcccgcagttcctgaagcacttt gccatgtgtcacgaccagtggctgatcaaagagaacatccagcagctgcgccaggcgctg tcggaccaaaatctgcagttgctgcccgactatgaacagcgcatacaggtgctgcgggaa ctcaactttatcgaccagtcgtcccgaatccagctcaagggcaaggttgcgtgcgagatc cacagcggcgacgagctggtgcttacggaactgatcctagacaacgtgctggctgactat gagccggctgagatcgccagcttgttgtcttgttttgtgttccaggagcggaccgactcg gaaccggctctaacggcgcgccttcagaagggcctggaaaccatcgttgccataagcgag aaggttaacaacgtccagacgctgcaccaggtgctgcaggtaggcgatgagtcggccgac tttgcgagtcgtccgcggttcgggttgatggaggttgtgtatgaatgggcccggggaatg agtttcaagaacatcacggacctaaccccggtgcttgaaggcaccattgtgagaacaatc acacggctggatgagacgtgccgtgaggtgaaaaatgcggccaggatcattggagacccg gagctgtaccaaaagatgcaggcggcgcaggaaatgatcaagcgcgatatcaccgcagtc gccagtctgtacatgtag

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