Mannheimia granulomatis: A4G16_03300
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Entry
A4G16_03300 CDS
T06759
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mgra
Mannheimia granulomatis
Pathway
mgra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4G16_03300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgra03019
]
A4G16_03300
Enzymes [BR:
mgra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A4G16_03300
Messenger RNA biogenesis [BR:
mgra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A4G16_03300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QIM66468
UniProt:
A0A6G8JHZ8
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All DBs
Position
676624..677853
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AA seq
409 aa
AA seq
DB search
MSNHLTEHRFIDFPIHTNVLNALDSKGFEFCTPIQAKTFPITLAGNDIAGQAQTGTGKTL
AFLVATFHYLLSNEIKIAKNQPRALILAPTRELAVQIAADAQLFLQHSDLKLALAYGGDG
YDKQLQEIEKGVDILVGTTGRVIDYVKQGIINLDKVQVIVLDEADRMFDLGFIKDIRYLM
RKSPPPQKRLTLLFSATLSPRVRELAYEDMNNAEYIEIEPLQRTGHRIKEELFYPSNEDK
MALLLTLLEEEWPERCMVFANTKHKCEEIWQYLSADGHRVGMLTGDIPQKKRLSLLDNFT
KGNLDILVVTDVAARGLHIPDVTHVFNYDLPDDKEDYVHRIGRTGRAGESGHSISFACER
YAVNLPAIEEYIGHQIPVSQYDKSSLLPLPKVNRSRNKHAFAQKRNGRN
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcatcttacagaacaccgctttattgatttccctattcacacgaatgtatta
aatgccttagatagcaaaggttttgaattttgtacaccgattcaagcgaaaacatttcca
attacgcttgccggcaatgatattgcagggcaagcccaaacaggcacgggaaaaacgtta
gcttttttagtagcaactttccattatttgttaagcaatgaaattaaaatagctaaaaat
cagcctagagcattaattttagcccctacccgagaattagccgtgcaaattgcagcagat
gcacagctttttctacaacattctgatctgaaattggccctggcttatggtggtgatggt
tatgataaacagctacaagaaattgaaaaaggtgtggatattttagttggtacaacaggg
cgagtgattgattatgttaaacaaggcattattaatttagataaagtccaagtgattgtg
ctagatgaggcggatcgaatgtttgatctgggttttattaaagatatccgttaccttatg
cgtaaatcgccaccaccgcagaaacgcctaacactattattttcagcaacgctttctcca
agagtgagagagcttgcctatgaagatatgaataacgccgaatatattgaaattgagccg
ttacaacgcacggggcatcgtattaaagaagagctattttatccctctaatgaagataaa
atggcgctattattaacgttacttgaagaagagtggccggagcgttgcatggtttttgct
aataccaagcataaatgcgaagaaatttggcaatatttatctgcagatggccatcgtgta
ggcatgctgaccggagatattccacagaaaaagcgtctatccttgcttgataattttact
aaaggcaatttagatattttagttgtaacagatgttgctgccagaggtttacatattcct
gatgtcacgcatgtgtttaattatgacttacctgatgataaagaagattacgtgcatcgt
attggcagaaccggtagggcgggggagagcggacattctatcagcttcgcttgcgagcgt
tacgcggttaatttgcctgcgatagaggagtatattggacaccaaattcctgttagtcaa
tatgataaaagctctttactgcctttgccgaaagtgaatcgttcaagaaacaaacatgct
tttgcgcagaaacgaaatggacgtaactag
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