KEGG   Mannheimia granulomatis: A4G16_03300
Entry
A4G16_03300       CDS       T06759                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
mgra  Mannheimia granulomatis
Pathway
mgra03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mgra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A4G16_03300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mgra03019]
    A4G16_03300
Enzymes [BR:mgra01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     A4G16_03300
Messenger RNA biogenesis [BR:mgra03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     A4G16_03300
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 CMS1 DKCLD
Other DBs
NCBI-ProteinID: QIM66468
UniProt: A0A6G8JHZ8
LinkDB
Position
676624..677853
AA seq 409 aa
MSNHLTEHRFIDFPIHTNVLNALDSKGFEFCTPIQAKTFPITLAGNDIAGQAQTGTGKTL
AFLVATFHYLLSNEIKIAKNQPRALILAPTRELAVQIAADAQLFLQHSDLKLALAYGGDG
YDKQLQEIEKGVDILVGTTGRVIDYVKQGIINLDKVQVIVLDEADRMFDLGFIKDIRYLM
RKSPPPQKRLTLLFSATLSPRVRELAYEDMNNAEYIEIEPLQRTGHRIKEELFYPSNEDK
MALLLTLLEEEWPERCMVFANTKHKCEEIWQYLSADGHRVGMLTGDIPQKKRLSLLDNFT
KGNLDILVVTDVAARGLHIPDVTHVFNYDLPDDKEDYVHRIGRTGRAGESGHSISFACER
YAVNLPAIEEYIGHQIPVSQYDKSSLLPLPKVNRSRNKHAFAQKRNGRN
NT seq 1230 nt   +upstreamnt  +downstreamnt
atgtcgaatcatcttacagaacaccgctttattgatttccctattcacacgaatgtatta
aatgccttagatagcaaaggttttgaattttgtacaccgattcaagcgaaaacatttcca
attacgcttgccggcaatgatattgcagggcaagcccaaacaggcacgggaaaaacgtta
gcttttttagtagcaactttccattatttgttaagcaatgaaattaaaatagctaaaaat
cagcctagagcattaattttagcccctacccgagaattagccgtgcaaattgcagcagat
gcacagctttttctacaacattctgatctgaaattggccctggcttatggtggtgatggt
tatgataaacagctacaagaaattgaaaaaggtgtggatattttagttggtacaacaggg
cgagtgattgattatgttaaacaaggcattattaatttagataaagtccaagtgattgtg
ctagatgaggcggatcgaatgtttgatctgggttttattaaagatatccgttaccttatg
cgtaaatcgccaccaccgcagaaacgcctaacactattattttcagcaacgctttctcca
agagtgagagagcttgcctatgaagatatgaataacgccgaatatattgaaattgagccg
ttacaacgcacggggcatcgtattaaagaagagctattttatccctctaatgaagataaa
atggcgctattattaacgttacttgaagaagagtggccggagcgttgcatggtttttgct
aataccaagcataaatgcgaagaaatttggcaatatttatctgcagatggccatcgtgta
ggcatgctgaccggagatattccacagaaaaagcgtctatccttgcttgataattttact
aaaggcaatttagatattttagttgtaacagatgttgctgccagaggtttacatattcct
gatgtcacgcatgtgtttaattatgacttacctgatgataaagaagattacgtgcatcgt
attggcagaaccggtagggcgggggagagcggacattctatcagcttcgcttgcgagcgt
tacgcggttaatttgcctgcgatagaggagtatattggacaccaaattcctgttagtcaa
tatgataaaagctctttactgcctttgccgaaagtgaatcgttcaagaaacaaacatgct
tttgcgcagaaacgaaatggacgtaactag

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