Mannheimia granulomatis: A4G16_04780
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Entry
A4G16_04780 CDS
T06759
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mgra
Mannheimia granulomatis
Pathway
mgra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4G16_04780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgra03019
]
A4G16_04780
03009 Ribosome biogenesis [BR:
mgra03009
]
A4G16_04780
Enzymes [BR:
mgra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A4G16_04780
Messenger RNA biogenesis [BR:
mgra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A4G16_04780
Ribosome biogenesis [BR:
mgra03009
]
Prokaryotic type
rRNA helicases
A4G16_04780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DRTGG
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
QIM66735
UniProt:
A0A6G8JHS6
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All DBs
Position
1012615..1014444
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AA seq
609 aa
AA seq
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MTTESLTFADLGLPQPILDAVNEMGFVTPSPIQQECIPHLLAGRDVLGMAQTGSGKTAAF
SLPLLAQIDPSQRHPQMLVMAPTRELAIQVADACEQFSKNMKGIRVVTVYGGQRYDIQLR
ALKQGSQVVVGTPGRILDHIRRGTLDLSELKFIVLDEADEMLRMGFIDDVETVMAELPEN
HQTALFSATMPEPIRRITRRFMKDPQEVKIKATERSAPDIEQSYWLVNGFRKNDALLRFL
EVEEFDAAIIFTRTKTGTIDITELCERNGYRTAALNGDMTQQAREQTLEKLRSGRLDILV
ATDVAARGIDIERISLVVNYDIPLEEESYVHRIGRTGRAGRSGRALLFVEPRERRLLRNI
ENLIKKPIEEVAIPNHEILMEKRREKFKARISKQLEHHDLEKYRELLEDLFTADQDHEEL
AAAMMMLLQEKQKLILPPDPVVRAARSERGRDRNDRNDRRNGREHRENNGVAMDLYRIEL
GREDGVEVRHIVGAIANEGDISSRYIGHIKLYDTYSTIELPQGMPNHLVQHFAHKARVLN
KQMQMSLIGTTNSGNEHPYDARGRRGGERRGDRNERGGRRDSRDNGFNKDRKGGFKEKRF
NDKGRSRRD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgaatctttaacatttgccgatttaggcttacctcaacctatccttgatgca
gtaaatgagatggggtttgtaacaccctctcctatccaacaagaatgtatccctcactta
ctcgccggccgtgatgttctcggtatggcacaaacaggtagcggtaaaacagcagctttc
tcactacctttactcgctcaaattgatccttctcaacgccatccacaaatgttggtaatg
gctccaactcgtgaactagctatccaagtagctgatgcttgcgaacaatttagcaaaaac
atgaaaggcatacgtgttgtaaccgtttacggtggacagcgttacgacattcaattacga
gctttaaaacagggctcacaagtggttgtcggcacacctggtcgtattcttgaccatatt
cgtcgtggtactttagacttatccgaactaaaatttatcgtgttagatgaagccgatgaa
atgctccgtatgggctttattgatgatgttgaaaccgttatggcagaattaccagaaaat
caccaaacggcgttattctcagcaacaatgccggaaccgattcgccgtattacccgccgc
tttatgaaagatccgcaagaggttaaaattaaggcgacagaacgctctgctccagatatc
gaacaaagctactggttagttaacggtttccgtaaaaatgatgcgttattacgtttctta
gaagtggaagaatttgacgcagccatcatattcacccgaaccaaaacaggcacaattgat
attaccgaattatgcgagcgtaatggctatcgtactgcagcgttaaatggtgatatgacc
caacaagctcgtgaacaaactttagaaaaattacgctcagggcgtttagacattttggtt
gcgaccgatgttgctgcccgtggtattgatattgaacgtatcagcctagttgtaaactat
gatattccgttagaagaagaatcttatgttcaccgtattggtcgtaccggtcgtgccggt
cgttcaggtcgtgcattattattcgttgagccacgtgagcgtcgtttgctacgtaatatc
gaaaatctcatcaaaaaaccaattgaagaagtggctattccaaaccacgaaattttaatg
gaaaaacgccgtgaaaaattcaaagcacgtatttctaagcaattagaacaccatgattta
gaaaaatatcgtgagttattggaagatttatttaccgccgatcaagatcatgaagaactg
gcagcggcaatgatgatgttactacaagaaaaacaaaaattaattcttccaccagaccct
gtagtccgcgctgcacgttcagaacgtggacgcgatcgtaacgatagaaacgaccgccgt
aatggtcgtgaacatcgtgaaaataacggtgttgcgatggatttataccgtattgaactg
ggtcgtgaagatggtgtagaagttcgccatattgtaggcgcaattgctaacgaaggcgat
atcagcagccgctatattggccatattaaactctatgatacctactcaaccattgaatta
ccacaaggtatgccaaatcacttagttcaacatttcgctcacaaagcgcgcgtgttgaat
aaacaaatgcagatgtcacttatcggcactacaaacagcggtaatgagcatccgtatgat
gctcgtggtcgtcgtggtggcgagcgtagaggtgatcgtaatgagcgtggcggccgccgt
gattcaagagataatggcttcaataaagatcgtaaaggcggttttaaagagaaacgcttt
aatgataaaggtcgctctcgccgtgactaa
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