KEGG   Mannheimia granulomatis: A4G16_04910
Entry
A4G16_04910       CDS       T06759                                 
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
mgra  Mannheimia granulomatis
Brite
KEGG Orthology (KO) [BR:mgra00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mgra02048]
    A4G16_04910
Prokaryotic defense system [BR:mgra02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    A4G16_04910
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: QIM66755
UniProt: A0A6G8JHU5
LinkDB
Position
complement(1044295..1046334)
AA seq 679 aa
MSWMQKLYHTYEAALQKESNLNEEPLTPVGHTQQNAHIVIVLKGDGEFRTARVMPPKTAI
MLPATESSENRTSGEAPHPLADKIQYVAKDYVAYGGEKKAYFGSYLHQLQAWCDSSASHP
KVSAILNYVKKGKVVEDLISVGVFQLDSEGKVLNKWEGEGEAPAIFSTLPKTKGEIEFGS
ALVCWSVEIKGDPQSDTWTDTTIQQSWIDYLASSDSQIGFCFIQGKESPISTMHPAKLRH
TGDKAKLISSNDTAGYTFRGRFETAEEAATISTEVSAKAHSALRWLISRQGIRNGEQVTV
AWAVSGEKIPSPLKDYFDEFYDNEDEEISKVENDVEIELPSETEGNIDHSVDLGKSAAEI
IKKKYHGYKAKLKAHEQISLLMLDSATPGRMALTYYQEFLPADYFANLEAWIDDFSWYQR
HSIETKNGKKNEKRTIWAVVPPSPFAIGNAVYGAATLSDSLKKQLYARLLPVIAGGKSVP
IPYDLVQQSFQVACNPHGCESWEWQRNIGVACALYKGWRTRHYDESERREYSMSLDKENR
SRDYIFGRLLAIAENLERMALNMASEIRATNAERYMPRFVTNPFKTWEQLERNLKPYKAR
LRKDYPVRISEKFVLDNPLAFLRKRENEITRLVCILAELEKSGCDLHKPLEPEFLLGYHS
QKMAYQNQSNTESEPSETN
NT seq 2040 nt   +upstreamnt  +downstreamnt
atgagttggatgcaaaagttataccacacgtatgaagctgctttacagaaagaatcgaat
ctgaatgaagaacctttaacgcctgttggtcacactcagcaaaatgcacatatcgtgatt
gtgttaaagggtgatggcgagtttcgaactgctcgtgttatgccgcctaaaacagcgatt
atgttgccggcaacggaatcttctgaaaaccgtaccagtggggaagcaccacatccgtta
gcagataaaatccaatatgtggctaaagattatgtcgcttatggcggtgagaaaaaagcc
tatttcggaagttatttgcaccaactacaagcttggtgtgattctagtgcatctcatccc
aaagtatccgctattctgaactatgtgaaaaaagggaaagtggttgaagacctaatctcg
gtaggcgtatttcagcttgattctgagggaaaagtgcttaacaagtgggaaggcgaagga
gaggctcctgcgattttttcaacattgcctaaaacgaaaggcgagattgaattcggttca
gcattggtttgttggagtgtagaaatcaagggcgatccacaaagtgatacttggacggat
acaaccattcaacaatcctggattgattatttggcttcatcggacagccaaataggcttt
tgttttatacaaggcaaggaaagccctatttctactatgcacccagctaaattacgccac
acaggcgataaggctaaactgatttcatccaatgataccgcaggttatactttccgcgga
cgttttgaaacagcagaagaggctgcgactatttctacggaggtctctgcaaaagcacac
agtgctttacgttggcttatctcccgtcaaggtattcgtaatggcgaacaagtcaccgta
gcgtgggcagtcagtggcgaaaaaatcccttctccattaaaagattatttcgatgaattc
tatgacaatgaggacgaagagataagtaaggtcgaaaatgatgtagaaattgaattgccg
tctgaaaccgaaggcaacattgatcattcagtagatttgggtaaaagtgcggctgaaatc
attaaaaagaaatatcatggttataaagccaagctcaaagcacacgagcagatttcgtta
ttgatgttagattcggcaacgccggggcgaatggctttaacctactatcaagaattttta
cctgcggattattttgccaatttagaggcgtggattgatgatttttcttggtatcaacgc
cacagcattgaaacgaaaaacggcaagaaaaacgagaaacgcacgatttgggcagtcgtt
ccgccttcgccattcgcgattggcaatgcagtgtatggagcagcaacattaagtgattcc
ctaaaaaaacaactttatgcccgcttgttaccagtgattgctggtggaaaaagtgttcct
atcccctatgatttagtacaacagagttttcaagtagcatgtaatccacatggttgtgaa
agttgggaatggcaacggaatatcggtgtggcttgtgccttatataaaggctggcgaacc
cgtcattatgatgaatcagaaaggagagaatactcaatgagtttagataaagaaaatcgc
tcgcgtgattatatatttggcagattattagctattgctgagaatctggagcgtatggca
ttaaatatggcaagtgaaatacgagcgactaatgctgaacgttatatgccacggtttgtt
acaaacccttttaaaacatgggagcaacttgaaaggaatcttaagccttataaagctaga
ctacgcaaggattatccagtaagaatttctgaaaaattcgttttagacaatccgcttgca
tttttacgtaagcgggaaaatgaaattactcggttagtttgtatcttagctgaattagaa
aaatcaggctgtgatttacataaaccgctagagccagagtttttacttggttaccacagt
caaaaaatggcttaccagaatcaatcaaatactgagtctgagccatctgaaactaactaa

DBGET integrated database retrieval system