Mannheimia granulomatis: A4G16_06010
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Entry
A4G16_06010 CDS
T06759
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mgra
Mannheimia granulomatis
Pathway
mgra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4G16_06010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgra03019
]
A4G16_06010
03400 DNA repair and recombination proteins [BR:
mgra03400
]
A4G16_06010
Enzymes [BR:
mgra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4G16_06010
Messenger RNA biogenesis [BR:
mgra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A4G16_06010
DNA repair and recombination proteins [BR:
mgra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A4G16_06010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
HEM4
Hanta_Gn-B
Motif
Other DBs
NCBI-ProteinID:
QIM66956
UniProt:
A0A6G8JIQ8
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All DBs
Position
1277041..1278840
Genome browser
AA seq
599 aa
AA seq
DB search
MNTTAISVLNNVFGYQKFRDGQEEVINAVLDKRDCLVIMTTGGGKSLCYQVPALCLEGIT
LVISPLISLMKDQVDQLITNGIEAAYLNSTQSIEEQQQVEQKALSGQLKLLYLSPEKVMT
QGFFQFISLCKISFIAVDEAHCVSQWGHDFRPEYTLLGRLRNTFPNVPLMALTATADPTT
RADILHHLRLQQPHIYLGSFDRPNIRYTVQEKFKPLEQLVQFIHKQQGKSGIIYCNSRKK
VEEITEKLSARKISVMGYHAGMNFEQRELVQNAFQRDNIQIVVATIAFGMGINKSNVRFV
VHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDPTDYAWLQKILLEEPESEQRNIKQHKL
QAIGAFAESQTCRRLVLLNYFGEHKQEACKNCDICLDPPQKYDGLLDAQKVMSVIYRTGQ
IFGQHHVIAVLRGMNNLKIREHNHDTLSVYGIGKEQSQNYWLNVIRQLIHLGLIYQNIAN
HSALQLTESARAFLRGEKPLQLALPRLGISATAFVQKQTSQRYDKDLFARLRFLRKQIAD
KENIPPYIVFNDATLQEMAEFLPTCKIEMLEINGVGERKFERFGEAFMTLIKEHQNNRK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaataccactgcaatttctgttttaaataatgtttttggttaccaaaaattccgagat
gggcaagaagaagtcattaatgccgttttggacaagcgcgattgcttggtcattatgacg
acaggtggtggaaaatctctttgctatcaagtgcctgccctctgcttggaaggcatcacc
cttgtgatctcaccactgatttcgttaatgaaagatcaggttgatcagctcattactaac
ggtattgaagctgcttatctcaattcaactcaaagcattgaagaacagcagcaagtcgag
caaaaagccttatccggacaattaaaactcctttatctttcaccggaaaaagtaatgacg
caaggcttctttcagtttatttcactatgtaaaatcagttttattgcggtggatgaagct
cattgcgtttcccaatggggacatgatttccgccccgaatatactttacttggtagatta
cgtaatacttttccaaatgtaccgttaatggccttaaccgccacggcagatcctacaact
cgggcagacattctgcaccatttacgcttacaacagccacatatttatttaggtagtttt
gaccgccccaatattcgctatacggtgcaagaaaaattcaaaccgttagaacagctagtg
cagtttatccataaacagcaaggtaaaagcggtattatttactgtaatagtcgtaaaaaa
gtcgaagagattaccgagaagctctccgcacgcaaaattagcgttatgggttatcatgcc
ggtatgaattttgaacaacgtgaattagtacaaaatgcctttcagcgggataatatccaa
attgtagtggcaaccattgcctttggaatgggaataaataaatcgaatgttcgttttgta
gtgcactttgacttacctcgctccattgaatcttactatcaagaaacagggcgagcaggg
cgagatgatttaccctcagaagccgttcttttctacgatccaactgattatgcttggcta
caaaaaatactactggaagaaccggaaagcgaacaacgtaatattaaacagcataaacta
caagccataggagcatttgctgaatcacaaacctgtcgccgattagtcctacttaactat
ttcggtgagcataagcaagaagcttgtaaaaactgcgatatctgtttagaccctccgcag
aaatatgatggcttactcgatgcgcaaaaagtcatgtctgtgatctatcgtacaggtcaa
atttttggtcaacaccatgtaattgctgtattgcgcggtatgaataatcttaaaattcgt
gaacataatcacgataccctatctgtttacggtatcggcaaagagcaaagccaaaattac
tggttgaatgtgattcgacagctcattcacttagggctaatttatcaaaatattgctaat
cactctgcactacaacttacagaaagtgccagagcctttttacgtggagagaaacctcta
caactggcattaccacgtttaggtatttcagctacggcattcgttcaaaaacaaaccagc
caacgttatgataaagatctctttgctcggttacgcttcctacggaaacaaattgcggat
aaagaaaatattccaccctatattgttttcaatgatgcgacgttacaagaaatggcagaa
tttttgcctacctgcaaaatagaaatgctagaaataaacggtgttggtgaaaggaaattt
gagcgttttggtgaggcttttatgaccttaatcaaagaacatcaaaataaccgaaaatag
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