Mannheimia granulomatis: A4G16_07270
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Entry
A4G16_07270 CDS
T06759
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mgra
Mannheimia granulomatis
Pathway
mgra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4G16_07270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgra03019
]
A4G16_07270
03009 Ribosome biogenesis [BR:
mgra03009
]
A4G16_07270
Enzymes [BR:
mgra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
A4G16_07270
Messenger RNA biogenesis [BR:
mgra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A4G16_07270
Ribosome biogenesis [BR:
mgra03009
]
Prokaryotic type
rRNA processing factors
A4G16_07270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
PNPase_C
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QIM67873
UniProt:
A0A6G8JLL7
LinkDB
All DBs
Position
1541728..1544661
Genome browser
AA seq
977 aa
AA seq
DB search
MLINATQKEELRVALVDGQRLFDLDIESPGHEQKKSNIYKGKITRVEPSLEAAFVDYGAE
RHGFLPLKEISREYFPSDYVFNGRPNIKDIIQEGQEVIVQVSKEERGNKGAALTTFISLA
GSYLVLMPNNPRAGGISRRIEGDERLELKEALDCLEVPEDVGLIVRTAGVGKSPEELQWD
LKVLLHHWEAIKKAAESRPAPFLIHQESDVIVRAIRDYLRRDIGEILIDNKKVFEKAKNH
IRLVRPDFINRVRLYEGEVPLFSHYQIESQIESAFQREVRLPSGGSIVIDVTEALTSIDI
NSSRSTRGCDIEETALNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQREVENRIR
EATRQDRARIQFARISRFGLLEMSRQRLSPSLSEASSHICPRCQGTGKVRDNESIALSIL
RLLEEEAIKENTAQVHTIVPVQIASYLLNEKRKAISSIEKRHDVQIVVVPAESMETPHFS
VYRLRENEVTPTLSYDLTKHYEAREEDDHPHYHNHSNDDVLVTRNEPVITVESVLQSSEL
NLQPSPMPAKPAKPSLFSRLVAAIKGWFATEEKVEEKPKPKSRNQRDRRQRRERSSRNTK
AENQERKQQQAQVAQQEEKASRPEKKQRRAVIEEVAGVTEQETRTHSRENQTERRQRRDL
RKKVRVETSDVAVTENVNTAETTVKAAEVENVQNISQIQPLVAEPVAENNTETRENNRQR
RLPRHLRVGNQRRRENQRATPSPMPLTSAVASPELASGKVWVALATSAKVEEKVQFLSVD
EMLEQQENRVTTEIEQPEHKISAKPSTSVAPLGGFVAQATERDLVKEKLGQAKTKTEEVA
QPAPEIQKSDVKEHIAPFGSVVSQHSERDLVKEKNERVGKFQSKATAAPAIVAENQTIET
PRSNYESSYTFDGKLGTFSRVKHTQSTMTVAAAPAESPESFAITQWQNSKYYFYGKGFGG
YSSAVSQVESAPRSTNT
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgttaatcaatgcaactcaaaaagaagagttgcgtgttgctcttgttgatgggcaacgc
ttatttgacttggatattgaaagcccgggtcacgaacaaaaaaaatcaaacatctacaaa
ggtaaaattacccgcgttgaacccagccttgaggcagcattcgtagattacggtgcagaa
cgccacggcttcctaccattaaaagaaatttcccgcgaatacttcccgtcagactatgtg
tttaacggtcgcccaaatatcaaagatattatccaagaaggtcaggaagtcattgttcaa
gtcagcaaagaagagcgaggtaacaaaggagcagccttaaccacctttatctctcttgcc
ggcagctatttagtattaatgccaaacaaccctcgtgccggtggcatttcccgccgaatt
gaaggcgatgagcgtttagagttaaaagaggctctagactgcttggaagtgcctgaagat
gtaggcttaatagtacgtaccgctggtgtcggtaaatcgcctgaagagttgcagtgggac
ttaaaagtcttattacatcactgggaagcgatcaaaaaagcggcagaatctcgtcctgca
ccgttcttaattcatcaagaaagcgatgtgattgtgcgagcaatccgcgattacctacgc
cgtgatattggtgaaatcttaattgacaacaaaaaagtgtttgagaaagcgaaaaaccat
attcgtttggttcgccctgatttcatcaaccgtgtacgtttatacgaaggtgaagtaccg
ctattcagccactaccaaattgaatcacaaattgaatcagcattccaacgtgaagtacgt
ttaccgtcaggcggttcaatcgttatcgatgtaactgaggcattaacctcaatcgacatc
aactcatcacgctcaacccgtggctgcgatattgaagaaacggcattaaataccaactta
gaagcagcagatgaaatcgcccgtcaattacgtttacgcgacttaggtggcctaatcgta
atcgactttattgatatgaccccggttcgtcaccaacgtgaagtagaaaaccgcatccgt
gaagcaacacgccaggaccgtgcaagaatccaatttgctcgcatttctcgtttcggttta
ttagaaatgagccgccagcgtttaagtccatcactcagtgaagcttcatcgcacatctgc
cctcgctgccaaggcacaggtaaagtacgtgataacgaatctatcgccttatcaatcttg
cgtctattggaagaagaagctattaaagaaaacaccgctcaggttcacaccattgtgccg
gtgcaaattgcaagctacttattaaatgaaaaacgtaaagccatctccagcattgagaaa
cgtcacgatgtacaaattgtggttgtaccggctgaaagtatggaaacgccacattttagc
gtttatcgcttgcgtgaaaatgaagtaacaccaaccttaagctatgatttaactaagcat
tatgaggcgcgagaagaagacgatcatcctcattatcacaaccacagtaatgatgatgta
ttagtcactcgtaatgaacctgttattacggtcgaatctgtattacaaagctctgaacta
aaccttcagccgtcaccaatgccagccaaaccggctaaaccatcactatttagccgtctc
gttgctgcaattaaaggttggtttgcaactgaagaaaaagtagaagaaaaaccaaaaccg
aaatcacggaaccaacgcgatcgtcgccaacgccgtgaacgttctagccgtaatacaaaa
gcagaaaatcaagaacgtaaacagcaacaagctcaagtggcacagcaagaagaaaaagca
agccgccctgagaaaaaacaacgccgagcggtgattgaagaagtagccggggttactgaa
caagaaacacgaactcactctcgcgaaaatcaaactgaacgtcgtcaacgacgtgattta
cgcaaaaaagttcgtgtagaaacctcagacgttgctgtaacagaaaatgtgaatactgcc
gaaactactgtaaaagcagctgaagttgaaaatgtgcaaaatatttcacaaattcaaccg
cttgtggctgaaccggtagcggaaaataacacggaaacacgtgaaaataaccgccaacgc
cgtttacctcgtcatctgcgcgtaggcaatcagcgtcgtcgtgaaaatcaacgtgctaca
ccttcaccaatgccattaacctcagcagttgcatctccagaacttgctagcggtaaagtt
tgggtagcactggcgacatcagcaaaagtggaagagaaagtacaattcctatctgttgat
gaaatgcttgagcagcaagaaaatagagtcactacagaaatagaacagccagagcataaa
atctcagctaaaccatctacttctgttgctccattaggcggttttgttgcacaagcaacc
gaacgcgacttagtgaaggaaaagttgggacaagcaaaaacaaaaacggaagaagttgca
caaccagcacctgaaatccaaaaatcagatgtgaaagaacatattgctccatttggcagt
gttgtttctcaacattctgaacgtgatttagtcaaagagaagaatgaacgcgtaggtaaa
ttccaatcaaaagcgactgctgcaccggcaatagttgcggaaaaccaaacgatcgaaaca
ccacgttctaattacgaaagtagttatactttcgatggaaaacttggcacattctctcgt
gttaaacatactcaatcaaccatgacggttgcggctgctccggcagaaagcccagaaagc
tttgctattactcaatggcaaaattcaaaatattacttctacggaaaaggctttggaggc
tatagcagtgcagtgagccaagtagagtctgcacctcgatctactaatacttaa
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