Mannheimia granulomatis: A4G16_10640
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Entry
A4G16_10640 CDS
T06759
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mgra
Mannheimia granulomatis
Pathway
mgra03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mgra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A4G16_10640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgra03021
]
A4G16_10640
03400 DNA repair and recombination proteins [BR:
mgra03400
]
A4G16_10640
Enzymes [BR:
mgra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A4G16_10640
Transcription machinery [BR:
mgra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A4G16_10640
DNA repair and recombination proteins [BR:
mgra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A4G16_10640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QIM67901
UniProt:
A0A6G8JLC6
LinkDB
All DBs
Position
2246526..2250842
Genome browser
AA seq
1438 aa
AA seq
DB search
MDQTSHPRGKKVKDLVKFLKAQSKSSDDFDVIKIGLASPDKIRSWSFGEVKKPETINYRT
FKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELA
CPVAHIWFLKSLPSRIGLILDMPLRDIERVLYFESYVVTEPGMTDLEKNQLLTEEQFMDA
EERWGDEFEAKMGAEGIQALLRDLDLEHQCEVLREELQETNSETKRKKITKRLKTLEAFL
QSGNKPEWMVMTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLVAP
DIIVRNEKRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVD
YSGRSVITVGPYLRLHQCGLPKKMALELFRPFIYSKLESRGIASTIKAAKKMVEREEPIV
WDILAEVIREHPILLNRAPTLHRLGIQAFEPLLIEGKAIQLHPLVCAAFNADFDGDQMAV
HVPLTLEAQLEARALMMSTNNVLSPASGDPIIVPSQDVVLGLYYMTREKVNGKGEGMYFL
DPREAEKAYRTGQAELHSRVKVRVTEYEKNEAGEFEEKTSLVDTTIGRAILWMIAPKGMP
YSLFNQTLGKKAISKLINESYRRLGLKESVVLADQIMYTGFAYAARSGASVGIDDMVIPE
QKYAIIEAAEAEVAEIQEQFNGGLVTAGERYNKVIDIWAAANERVAKAMMENLSTEEVLN
REGNPEKQASFNSIFMMADSGARGSAAQIRQLAGMRGLMARPDGSIIETPITANFREGLN
VLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVIIEDDCGTHEGIVMTPLIEG
GDVKEALRDRVLGRVVAEDVLKPGTDEVLIPRNTLLDEKWCDVVDRESVDVIKVRSVVTC
DTDFGVCAKCYGRDLARGHLINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKES
SIQVKNAGTIKLANAKFVTNKDGKIVLTSRNTELTVIDTFGRTKENYKVPYGAVLSKNDG
AEVSVGEVVANWDPHTMPVISEVSGRIQFSDIVDGLTVTRQTDELTGLSSIVVQDVGERA
TAGKDLRPALRLVDSNGNDILIPGTDVPAQYFLPGKAIVTLDDGAEIAVGEALARIPQES
VGTKDITGGLPRVADLFEARKPKEPAILAEISGIVSFGKETKGKRRLVITPAEGEAFEEM
IPKWRQLNVFEGELVQRGDVISDGAETPHDILRLRGVHAVTDYIVNEVQEVYRLQGVKIN
DKHIEVIVRQMLRKAIITNAYDSEFLEGEQVEVARVKIANRKRAEEGKPLVEFERELLGI
TKASLATESFISAASFQETTRVLTEAAVAGKQDELRGLKENVIVGRLIPAGTGFAYHQAR
AKKRAQMEAGIAVSPEFEAPAAKEKSFVTDADIEAEFEFVADDATQSLAALLNAGDEE
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
ttggatcaaacttctcaccctaggggcaaaaaagtgaaagacttagtgaagtttttaaaa
gcacaatcaaaatcaagcgatgatttcgatgtgattaaaatcggtttagcatcaccagat
aagatccgttcttggtcttttggtgaggtaaaaaaacctgaaaccattaactaccgtacc
tttaaacctgagcgtgatggcttattttgcgcacgtattttcgggccggtaaaagattat
gaatgtttgtgtggtaaatacaaacgtttaaaacaccgtggtgtaatctgtgaaaaatgt
ggtgttgaagttacccaaactaaagtacgccgtgagcgtatgggacacattgaattagcg
tgtccggttgcacatatttggttcttaaaatcacttccatcccgtatcggcttaatttta
gatatgccattacgtgatattgaacgtgtactttattttgaaagctatgtagtaactgag
ccgggaatgactgatttggagaaaaatcagttattaactgaagaacagtttatggatgca
gaagagcgttggggtgatgagttcgaagcgaaaatgggtgcagaaggtatccaggcatta
cttcgtgacttagatttagaacaccaatgcgaagttttacgtgaagagttacaagaaact
aattcagaaactaaacgtaaaaaaattactaaacgtttaaaaactttagaagcattcttg
caatcaggcaacaaacctgagtggatggtaatgacagtattacctgttcttccaccagat
ttacgtccgttagtaccacttgatggtggccgttttgcaacttctgacttaaacgattta
taccgccgtgtaattaaccgtaacaaccgtttaaaacgcttgttagacttagttgcaccg
gacattatcgtacgtaacgaaaaacgtatgttacaagagtctgtggatgcgttattagac
aatggtcgtcgtggtcgcgcaattactggttcgaacaaacgtccattaaaatcgttagcg
gatatgatcaaaggtaaacaaggtcgtttccgtcaaaacttattaggtaaacgtgttgac
tattctggtcgttcggtaattaccgtaggcccatacttgcgtctacaccaatgtggttta
ccgaaaaaaatggcattggaattattccgtccgttcatctactctaaattagaatctcgt
ggtattgcatcaactatcaaagctgcgaagaaaatggtagagcgtgaagagccgattgta
tgggatattcttgcagaagttattcgtgaacatccgattctacttaaccgtgcaccaacg
cttcaccgtttgggtattcaagcgtttgaaccgttgttaatcgaaggtaaagcaattcag
ttacacccacttgtgtgtgcggcgttcaatgcggacttcgacggtgaccaaatggcggta
cacgttccattaacgcttgaagctcagttagaagctcgtgcattaatgatgtcaaccaat
aacgtactttcaccggcaagtggtgatccgattatcgttccatctcaagacgttgtatta
ggcttgtactacatgacgcgtgagaaagtaaacggtaaaggtgaaggcatgtacttcctt
gaccctcgtgaagcggagaaagcttatcgtaccggtcaggcagaattacattcacgtgta
aaagtgcgtgtaacagaatatgagaaaaatgaagctggtgagttcgaggagaaaacttca
ttagtggataccactattggtcgtgctattctttggatgatcgcaccaaaaggtatgcct
tattcactgttcaaccaaactttaggtaagaaagcgatctcaaaattaatcaatgagagc
taccgtcgtttaggtttgaaagagtctgtggttttagctgaccaaattatgtacacaggt
tttgcttacgctgcacgttcaggtgcctcagttggtattgatgatatggttattccagag
caaaaatacgcaatcattgaagcagctgaagctgaagtagcagaaattcaagaacagttt
aacggtggtttggtaacagctggtgagcgttataataaagtaatcgatatttgggctgca
gcaaatgaacgtgttgctaaagcgatgatggaaaacctttcaactgaagaagtgctcaac
cgtgaaggtaatcctgaaaaacaagcatcgtttaacagcatctttatgatggcagactct
ggtgcgcgtggttctgcggcacagattcgtcagcttgccggtatgcgtggtttgatggct
cgtccggatggctctattattgaaacgccaatcacagcaaacttccgtgaaggcttaaac
gttcttcagtactttatttcaacccatggtgcacgtaaaggtcttgcggatactgcatta
aaaacagcgaactcaggttacttaacccgtcgtttagttgatgtggcacaagatttagtg
atcatcgaagatgactgtggtacacacgaaggtatcgtgatgacccctctcatcgaaggt
ggtgatgtaaaagaagcattacgtgatcgcgtattaggtcgtgtggtggctgaagatgta
ttaaaaccgggtacagatgaagtgttaattcctcgtaacactttattagatgagaaatgg
tgtgatgtagttgacagagaatctgttgatgtgatcaaagtacgttctgtagtaacttgt
gatacagacttcggtgtgtgtgcgaaatgttacggccgtgatttagcacgtggtcaccta
atcaatcaaggtgaagcggttggtgttatcgcggcgcaatctatcggtgagccgggtaca
cagttaacgatgcgtacgttccatatcggtggtgcggcatctgcggcagcgaaagaatca
agcattcaagtaaaaaatgcaggtacgattaaattagcgaatgctaaatttgttacgaat
aaagatggcaagatcgttctgacatctcgtaatacagaattaaccgtgattgatactttc
ggtcgtactaaagagaactataaagtaccttacggtgctgtgctttcgaaaaatgatggc
gcagaggtatctgtaggtgaagtagttgctaactgggatccgcatacaatgcctgttatc
tcagaggtatcaggtcgtatccaatttagtgatatcgttgatggcttaactgttactcgt
caaaccgatgagttaaccggtttatcatcaatcgtagtacaagatgtgggtgagcgtgca
acagctggtaaggacttacgtccggcattacgcttagtcgatagcaatggtaacgatatc
ttaattccgggtacagatgtgccggcacaatacttcttaccgggtaaagcgattgtaacg
cttgatgatggcgcagaaattgcagtcggtgaagcattagcccgtattccacaagaatct
gtgggaacgaaagatattaccggtggtcttccacgcgttgcagatttatttgaagctcgt
aaaccaaaagagccagcaatccttgcggaaatctcaggtattgtttcattcggtaaagaa
accaaaggtaaacgtcgcttggtaattactccggcggaaggtgaagcgtttgaagagatg
attccaaaatggcgtcaacttaacgtattcgaaggtgagttagtacaacgcggagatgtg
atctcagatggtgcagaaacaccacatgatatcctacgcttgcgtggtgtacatgctgta
actgactatattgtgaacgaagtgcaagaagtttaccgcttacaaggggtaaaaattaac
gataagcacattgaagttatcgttcgacaaatgctacgtaaagcaattattactaatgca
tacgacagcgagttcctcgaaggggagcaagttgaagtggctcgtgtgaaaattgcgaac
cgcaaacgtgcagaagaaggcaaaccattagttgagtttgagcgtgaattgcttggtatt
actaaagcatcacttgcgactgagtcatttatctcagcagcatcattccaagaaacaaca
cgtgtgcttactgaagccgcagttgcaggtaaacaagatgagttacgtggcttaaaagag
aacgtaattgttggtcgtttaattccagctggtactggttttgcttaccaccaagcacgt
gcgaagaagcgtgctcaaatggaagccggcatcgcagtttcacccgagtttgaagctcca
gctgcaaaagaaaaatcatttgtgaccgatgcagacattgaagctgaatttgagtttgtg
gcagatgatgcaactcaaagtttagcagcattgttaaatgcaggtgacgaagagtaa
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integrated database retrieval system
