Methylocaldum gracile subsp. desertum: ACR2R6_03765
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Entry
ACR2R6_03765 CDS
T11793
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mgrd Methylocaldum gracile subsp. desertum
Pathway
mgrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACR2R6_03765 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgrd03021
]
ACR2R6_03765 (rho)
03019 Messenger RNA biogenesis [BR:
mgrd03019
]
ACR2R6_03765 (rho)
Transcription machinery [BR:
mgrd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACR2R6_03765 (rho)
Messenger RNA biogenesis [BR:
mgrd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACR2R6_03765 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
Mor
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
XWN73304
LinkDB
All DBs
Position
complement(870761..872017)
Genome browser
AA seq
418 aa
AA seq
DB search
MNLTDLKRKPVSELIEIAESLDIEGVARTRKQDLIFSILKKQAKSGEDIYGDGVLEILSD
GFGFLRSADSSFLAGPDDIYVSPSQIRRFSLRTGDTISGKIRPPKDNERYFAMLKVEQIN
YEPPENAKHKILFSNLTPLFPVERLQLEIGNGTTEDLTARVIDLVAPIGKGQRGLIVSPP
KAGKTMILQNIAHSVAEKNPECYLIVLLIDERPEEVTEMQRSVKGEVVSSTFDEPPARHV
QVAEMVLEKAKRLVEHKRDVVILLDSITRLARAYNTVIPSSGKVLTGGVDANALERPKRF
FGAARNIEEGGSLTIIATALVDTGSRMDEVIYEEFKGTGNMELHLERKIAEKRVYPAINI
NRSGTRREEYIVPADELQKCWILRKILQPMDEMAASEFLLGKLKDTKTNAEFFDMMKR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaccgatcttaaacgcaaacccgtttccgaactcatcgaaatcgctgaatca
ctcgacatcgaaggcgttgctcgaacgcgcaaacaggatttgatcttttcgatcctgaaa
aaacaggctaaaagcggggaagatatctacggcgacggggtattggaaatcctgagcgac
ggattcggctttctgaggtccgccgacagctcctttttggccggacccgatgatatttac
gtctcgcccagtcagattcgtagatttagcttacgaaccggagacacgatttccggaaag
attcgtccacccaaggacaacgagcgctacttcgcgatgctcaaggtcgagcaaatcaac
tatgagccgccggaaaacgccaagcacaagatcttattctctaaccttactcccttattt
cctgtcgaacgcctgcaactggagatcggcaacggaaccaccgaggatttgaccgctcgg
gtgatcgacctggtcgcaccgatcggcaaagggcagcgcggcttgatcgtgtcgccgccg
aaagccggcaagaccatgatcctccagaacatcgcccactcggtcgccgaaaagaatcct
gaatgctacctgatcgtcctactgatcgatgaacggccggaagaagtcaccgagatgcag
cgcagcgtcaagggcgaagtcgtatccagcaccttcgacgaaccgccggcgcgtcacgtg
caagtcgcggaaatggtcctggaaaaagccaagcgcctagtcgagcacaagcgcgatgtc
gtcatccttctcgactctatcacccgccttgcccgtgcttacaacacagtgatcccgtcc
tccggcaaggtgttgaccggcggcgtggacgccaatgccctggagcgccccaagcgattt
ttcggtgccgctcggaatatcgaggaaggcggcagcctcacgattatcgccaccgcgctg
gtcgataccgggtcgcgcatggacgaagtgatctacgaagaattcaagggcaccggcaat
atggaattgcacctagagcggaaaatcgccgagaagcgcgtttatccggccatcaatatc
aaccggtccggaacccgccgcgaggaatacatcgttccggcggacgaactgcaaaaatgc
tggattttacgcaaaatcctgcaaccgatggacgaaatggcagcgagtgaatttctgctg
ggcaaactgaaggacaccaagactaacgccgagttcttcgacatgatgaagcgctga
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