Methylocaldum gracile subsp. desertum: ACR2R6_14520
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Entry
ACR2R6_14520 CDS
T11793
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
Organism
mgrd Methylocaldum gracile subsp. desertum
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
HHH
RNA_pol_A_CTD
PTCB-BRCT
5_3_exonuc
BRCT_2
DNA_pol_lambd_f
POLH-Rev1_HhH
Zn_ribbon_NUD
Zn_ribbon_LysW
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
XWN70932
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Position
3317598..3319610
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AA seq
670 aa
AA seq
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MNAPEEIKRRADELRKEIEFHNLRYYQLDSPLISDAEYDRLMQELLAIERQYPELATPDS
PTQRVGAPPVAAFATVRHEIPMLSLDNAFSDEDAEDFHRRVSQRLGRNDIGYLVEPKLDG
LAVSLIYDKGVLVCGATRGDGQTGEDITHNVRTIRDIPLRLRGSGWPERFEVRGEVFMPK
KGFLALNERARQNGDKVFVNPRNAAAGSLRQLDPKITASRRLCFFSYGYGIFPSDQLPDT
QKELMDRFKSWGIPVSPELHVVQGIAGCLAYYRDLLARRHDLPYEIDGVVYKVDRLADRS
ALGFVARAPRWAIAHKFPAEEATTKVIAIEVQVGRTGALTPVARLEPVFVGGVTVTNATL
HNADEVHRRDIRAGDTVVVRRAGDVIPEVVKSLPELRPADAPVFQMPSHCPVCGAEVELE
PGEAIARCSGGLFCPAQHKESIKHFASRRAMDIDGLGDKLVDQILENKLIETVADLYRLT
AEQLAALERMGRKSAENLINALERSKHTTLSRFLFALGIREVGEVTAHTLAAHFRTLDNI
VAADEEELQNVPDIGPSVAHHIHTFFRQPHNVGVVQALLDAGVHWEEVAEVKTEQPLQGR
TFVITGTLSSMSREEAKARLQALGGKVTGSVSKNTSYVIAGADPGSKLAKAQELGVEVLD
EAAFLDLVGN
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcgccggaagagattaaacgtcgcgcggacgaattgcgcaaagaaatcgaattc
cacaatctacgctactatcagctcgattcgccgctgatttccgacgccgagtacgaccgc
ctgatgcaggagctcttggcgatcgagcgccagtatccggaacttgccacccccgattcc
ccgacacagcgggtcggcgctccgccggtcgcagcatttgccacggtacgccacgaaatc
cccatgctgtcgctggacaacgccttcagcgacgaggacgccgaggatttccatcgccgc
gtgagccagcggctcggacgcaacgacatcggatatctggtagaaccgaagctcgacggc
ctcgcggtcagcctcatctacgacaagggcgtcctggtttgcggggccacgcgcggcgac
ggtcagaccggcgaggacatcacccacaacgtccgcacgatccgcgacattccgctgcgg
ctcaggggcagcggctggccggaacgcttcgaggtgcggggcgaagtgttcatgccgaaa
aagggttttctcgccttgaacgagcgggcgcggcaaaacggcgacaaggtcttcgtcaac
ccgcggaatgccgccgccggaagcctccgccaactcgacccaaagattaccgcctcacgc
cgcctctgcttcttttcttacggctatggcatctttccgagcgaccagctgccggatacc
cagaaagagttgatggaccggttcaagtcctggggcattcccgtcagtccggaactacac
gtggtccaaggcatagccggctgtcttgcttactatcgggacctcttggcccggcggcac
gatctcccctacgaaatcgacggcgtggtttacaaagtggaccgtctggcggaccggagc
gcattaggtttcgtcgctcgcgcgccgcgttgggccatcgcccataaattccccgcggaa
gaagccaccaccaaagtcatcgccattgaggttcaagtgggacgcaccggcgccctgacc
ccggtggcgcggctcgaacccgttttcgtcggcggcgtcaccgtaaccaatgcgacgctg
cacaatgcggatgaagtgcacaggcgggatattcgggccggcgatactgtcgtcgtccgg
cgcgccggcgacgtgatcccggaagtggtgaaaagcctgccggaactccgcccggccgac
gccccggtcttccaaatgcctagccactgccccgtgtgcggcgcggaggtggaattggag
cccggcgaagccatcgcccgttgcagcggcggcctcttttgccccgcgcagcacaaggaa
tccatcaagcatttcgcctcgcgccgcgccatggacatcgacggcctgggcgacaagctg
gtcgatcagattctcgaaaacaagctgatcgagacggtcgccgatctctaccgactgacc
gcggaacagctggcggcactggagcgcatggggcgtaaatcggcggagaacctgatcaat
gcgctggaacggagcaagcatactaccctgtcccgcttcctttttgcgctgggcattcgg
gaagtcggcgaagtcacggcgcacaccttggcggctcactttcgcaccctcgacaacatc
gtggccgcggacgaggaagaactgcagaatgttcccgacataggcccttccgtggcccat
catatccataccttcttccggcaaccgcacaatgtcggcgtggtccaagcgctgctcgat
gccggggtgcattgggaagaagtcgcggaggtaaaaaccgagcaaccgctccagggccga
accttcgtcatcaccggcacgctgtcctccatgagtcgagaggaggcaaaagccaggctt
caggctctaggcggcaaggtcaccggtagcgtgtccaagaacaccagctacgtgatagcc
ggagccgatcccggctcgaaactggctaaggcccaggaactcggtgtcgaggtattggac
gaagcggcgtttctggacttggtaggaaattaa
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