Methylocaldum gracile subsp. desertum: ACR2R6_22000
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Entry
ACR2R6_22000 CDS
T11793
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mgrd Methylocaldum gracile subsp. desertum
Pathway
mgrd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mgrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACR2R6_22000 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgrd03400
]
ACR2R6_22000 (uvrB)
DNA repair and recombination proteins [BR:
mgrd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACR2R6_22000 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACR2R6_22000 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_30
AAA_33
SBDS_domain_II
AAA_22
Kinesin
DUF87
Motif
Other DBs
NCBI-ProteinID:
XWN74820
LinkDB
All DBs
Position
complement(4970746..4972800)
Genome browser
AA seq
684 aa
AA seq
DB search
MILDETLPLNPTRGKSFDLHSQFKPSGDQPEAIRQLIEGLGDGLLHQTLLGVTGSGKTFT
VANVIQAVQRPTLILAPNKTLAAQLYGEMKEFFPENSVEYFVSYYDYYQPEAYVPASDTY
IQKDASLNEHIEQMRLSATKALIERRDTIIVATVSSIYGLGEPASYFSMVLHLVRGDMIS
QRTILRRLAELQYTRNETELRRATYRVRGDVIDVFPAESEREALRIELFDDEIERLSLFD
PLTGEIISRIARYTVYPKTHYVTPREKIMEAVDQIKADLKVRLEELRSLNKLVEAQRLEQ
RTLFDLEIMLEVGYCSGIENYSRYLSGRAPGEPPPTLFDYLPADALLVIDESHVTIPQLG
AMYRGDRSRKETLVEYGFRLPSALDNRPLKFEEFEARSPQRIYISATPGPYELKHSGAVI
EQVVRPTGLVDPEVEIRPALSQVEDLLSEIRERIARSERVLVTTLTKRMAEDLTEYLFEH
DIAVRYLHSDVETVERVEIIRDLRLGRFDVLVGINLLREGLDIPEVSLVAILDADKEGFL
RSTVSLIQTIGRAARNLRGKAILYADTVTGSIQRAIEETERRRAKQIDYNKRTGLTPTGI
SKRVTDILEVPIPGALQTGSGKKKLAKVAEKGADYHAVKPAEAAKLIKQLEEKMYTHARE
LEFEEAARLRDEIRRIQAEVFSEA
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgatactcgatgaaaccttgcccctgaatcccaccaggggaaaaagtttcgatcttcat
agccaattcaagccgtccggcgatcaaccggaagcgatccggcaactgatcgaaggtctc
ggcgacggcttgttacaccagactcttttgggcgtcacgggttccggcaaaaccttcacc
gtcgccaatgtcattcaggccgtgcagcgcccgacgctgatcctggcgccgaacaagacg
ctggccgcccagctttacggggaaatgaaggaatttttcccggaaaactccgtggaatac
ttcgtttcctattacgactactatcagcccgaagcatacgtcccggcttccgatacctat
atccagaaggacgcctcgctcaacgagcatatcgagcagatgcgcctgtcggccaccaag
gcgctgatcgagcggcgcgacacgatcattgtggcgaccgtgtcgtccatctacggcttg
ggcgagccggcctcctatttcagcatggtgctgcatctggtgcgcggggacatgatcagc
cagcgaacgattctgcgccggctggccgaacttcaatacacccgcaacgaaaccgagctg
cgccgcgccacctaccgggtgcggggcgatgtgatcgacgtgtttccggcggaatccgaa
agggaagcgctgcgcatcgagttgttcgacgacgagatcgaacggctatcgctgttcgat
cccctgactggggagatcatttcccgcatcgcccgctacacggtctatcccaagacccat
tacgtcacgccgcgggaaaaaatcatggaagccgtggatcaaatcaaggccgatctcaag
gtacggctggaggagctgcggtctttgaacaagctggtggaagcccagcgcctggagcag
cgcacgctattcgatctcgaaatcatgctggaagtcggctattgctcgggcatcgagaac
tattcgcgctatctctccggccgcgcgccgggcgaacccccgcccaccctgttcgattac
ctgccggccgatgccttgctggtaatcgacgagagccacgtcaccattccgcagctcggc
gccatgtaccggggcgaccgctcgcgcaaggaaacgctggtggagtacggttttcgcctg
ccgtccgcgctggacaaccggccgctcaagttcgaggagttcgaggcccgttcgccgcag
cgcatctacatctcggcgacgccgggaccgtacgaactcaagcattccggagccgtcatc
gagcaggtggtgcggccgaccggcctggtggaccccgaggtggaaatacgccccgcgctg
agccaggtggaagacctgctttcggaaatccgcgaacgcatcgcccgcagcgaacgcgtg
ctggtcacgacgctgaccaagcgcatggcggaagatctgaccgaatatctgttcgagcac
gacatcgccgtgcgttacctccattccgacgtcgaaaccgtggagcgcgtcgagatcatc
cgcgacctccggctcggtcggttcgacgtgctcgtgggtatcaacctgctgcgggaaggt
ctggacatccccgaagtctcgctggtcgccatcctcgacgccgacaaggaaggtttcctg
cggtctaccgtttcgctcattcagaccatcggccgcgccgcccgcaaccttcgcggcaag
gcaatcctctatgcggacacggtcaccggctcgatccagcgggcgatcgaagaaaccgaa
cgccgccgtgccaagcagatcgactacaacaagcgaacgggcctcaccccgaccggtatc
tcgaagcgcgtgacggacatcctggaagtcccgataccgggcgctttacaaacgggttcc
gggaaaaagaagctggccaaagtggccgagaaaggcgccgactaccacgcggtaaaaccg
gcggaagccgccaagctgatcaagcagctcgaagaaaagatgtacacccacgcccgcgaa
ctagaattcgaggaagcggcacgattgcgcgacgaaattcggcggattcaggcggaagtg
ttttccgaggcatag
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integrated database retrieval system
