Mycolicibacterium grossiae: FZ046_02605
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Entry
FZ046_02605 CDS
T06593
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mgro
Mycolicibacterium grossiae
Pathway
mgro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FZ046_02605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgro03019
]
FZ046_02605
03400 DNA repair and recombination proteins [BR:
mgro03400
]
FZ046_02605
Enzymes [BR:
mgro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FZ046_02605
Messenger RNA biogenesis [BR:
mgro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FZ046_02605
DNA repair and recombination proteins [BR:
mgro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FZ046_02605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HEM4
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QEM43818
LinkDB
All DBs
Position
complement(520726..522810)
Genome browser
AA seq
694 aa
AA seq
DB search
MVTRERAQDLLEQLAGPNAVLRDDQWTAIEALVAQRKRALVVQRTGWGKSAVYFIAAKLL
RQEGRGATVIVSPLLALMRNQVQAAERAGVRAATINSSNVADWADVHRAVDAGEVDVLLV
SPERLNNPDFRDDVLPALARDAGLVVIDEAHCVSDWGHDFRPDYRRIRTLIAELGSDIPV
LATTATANDRVVEDVRAQLGVGGPGTDTLVLRGGLDRESLRLAVVKVGSPARRTAWLADH
LDALPGSGIVYTLTVAQARDVAAMLAERGHAVAAYTGATEAAEREQLERDLLDNRVKALV
ATSALGMGFDKPDLGFVVHLGAPASPIAYYQQVGRAGRSTDSAEVVLLPGAEDREVWRYF
ASVAFPSEALVRKVIDALERDRPQSTPALEPLVDLNRTRLEMVLKVLDVDGAVRRVKGGW
VATGEPWTYDEARYRTLDEARQREQQAMLDYLDTDECRMAFLRRQLNDPELVEGERCGRC
DNCTGAHYEADVDEAAVAATQERLMRPGVEVAPRKQWPSGLAKLGVDLSGKIADGPLPGR
VIGRLTDLGWGARLRAVLDAPDAEAPDDLVRAAVDVLAAWTWDARPVAVMALDSERHPRL
IASLAARLADLGRLTDLGVLRYAPERRPVTAANSAYRVAALAGAFEAPDLPALDGPVLLV
DDLTDPGWTATMAARVLRGSGAPAVLPFAVAAVS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgcgggaacgggcgcaggacctcctggagcagctggccggaccgaacgccgtg
ctgcgggacgaccagtggaccgccatcgaggcgctggtggcgcagcgcaagcgtgcgctg
gtggtgcaacggaccgggtggggcaaatccgcggtgtacttcatcgccgccaagctgctg
cggcaggagggccgcggtgccacggtgatcgtgtcgccgctgctggcgctcatgcgcaac
caggtccaggccgccgaacgcgccggggtgcgggcggccaccatcaattcgagcaacgtc
gccgactgggccgacgtgcaccgggccgtcgacgcgggtgaggtcgacgtgctactcgtc
agcccggaacggctgaacaacccggacttccgcgacgacgtcctgcccgccctcgcccgc
gacgccggcctcgtcgtcatcgacgaggcgcactgcgtctcggactggggacacgacttc
cgccccgactatcggcgcatccggacgctgatcgccgaattgggcagtgacatcccggtg
ctcgccaccacggccaccgccaacgaccgcgtcgtcgaggacgtgcgggcgcagctcggg
gtcggtgggccgggcaccgacacgctggtgttgcgcggtggcctcgaccgggagtcgctc
cggctggcggtggtgaaggtcggcagccccgcccggcgcacggcgtggctggccgaccac
ctcgacgcgctgcccggttccggcatcgtctacaccctcaccgtcgcccaagcgcgcgac
gtcgcggcgatgctggccgagcgcggccacgccgtcgcggcctacacgggtgccaccgag
gccgccgagcgcgaacaactggaacgcgatctgttggacaaccgggtcaaggcgctggtc
gccacgtcggcgctgggcatgggcttcgacaaacccgacctcggcttcgtggtgcacctc
ggcgcgccggcgtccccgatcgcctactaccagcaggtgggacgtgccggccgctcgacc
gacagcgcggaggtggtgctgcttcccggcgccgaggaccgcgaggtgtggcggtacttc
gcctcggtggcctttccgtcggaagcgctggtgcgcaaggtaatcgacgccctggagcgg
gaccggccgcagtcgacgccggcgctcgagccgctggtggacctcaaccgcacccggctc
gagatggtgctcaaggtgctcgacgtcgacggggccgtgcggcgcgtgaagggcggctgg
gtcgccaccggtgagccgtggacctacgacgaggcgcgctaccgcacgctcgacgaggcg
cggcagcgcgagcagcaggcgatgctcgactacctggacaccgacgaatgccggatggcg
tttctgcggcgacaactcaacgatcccgaactcgtcgagggcgagcggtgcgggcgctgc
gacaactgcaccggcgcccactacgaggccgacgtcgacgaggccgccgtcgccgccacc
caggagcggctcatgcggccgggcgtcgaggtcgcaccgcgcaagcagtggccgtccggt
ctggcgaagctcggcgtcgacctgagcggcaagatcgccgacggtccgctacccggccgc
gtcatcggacggctcaccgatctggggtggggagcgcggctgcgggcggtcctcgacgcg
cccgacgcggaggctcccgacgatctggtgcgcgcggcggtcgacgtgctcgccgcgtgg
acgtgggacgcgcgtccggtcgcggtgatggcgctcgactccgagcggcacccgcggttg
atcgcgtcgctcgccgcccggctcgcggacctcggccggctgaccgatctgggcgtcctg
cgatacgcgcccgagcggcgaccggtgacggccgccaactcggcctaccgcgtcgcggcc
ctcgcgggggcgttcgaggcgcccgacctgcccgcgctcgacggcccggtgctgctcgtg
gacgacctcaccgacccggggtggacggccaccatggcggcacgggtgctgcgcgggtcg
ggcgctccggccgtgctgccgttcgcggtggccgccgtcagctga
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