Mycolicibacterium grossiae: FZ046_11200
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Entry
FZ046_11200 CDS
T06593
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mgro
Mycolicibacterium grossiae
Pathway
mgro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mgro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FZ046_11200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgro03021
]
FZ046_11200
03400 DNA repair and recombination proteins [BR:
mgro03400
]
FZ046_11200
Enzymes [BR:
mgro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FZ046_11200
Transcription machinery [BR:
mgro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FZ046_11200
DNA repair and recombination proteins [BR:
mgro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FZ046_11200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QEM45263
LinkDB
All DBs
Position
2353604..2357560
Genome browser
AA seq
1318 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRNWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIVCERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITDVDNEMRHNELSTLEAEMVVEKKAVEDQRDLDLAERSQKLEAD
LAELERDGAKSDVRRKVRDGGEREMRQLRDRAQRELDRLDEIWTTFTKLAPKQLIVDEVL
YRELQDRYGEYFTGAMGAESIKKLIETFDIEAEAESLRDTIKNGKGQKKLRALKRLKVVA
AFQQSGNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGKPLAMPRLDMVTGLYYLTTLIEGDTGEYT
PAAKDAPEEGVYSSPAEAIMARDLGALSVRAKIKVRLTHLRPSAAKEAELFGDEGWKPGD
AWTAETTLGRVLFNELLPKGYPFVDEQMHKKVQARIINDLAERYPMIVVAQTVDKLKDAG
FYWATRSGVTVSMADVLVPPQKQEILERHEAEADSIEKQYQRGKLNHEERNGELVKIWQK
ATEEVGEALEAYYPSDNPIITIVKSGATGNLTQTRTLAGMKGLVTNPKGEYIPRPIKSSF
REGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRETDCDTERGIAVT
LAEQDATGALIRDAHVETAAFARTLASDAVDENGTVIVERGHDLGDPAIDALLAAGISQV
RVRSVLTCASAAGVCAMCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV
TGGADIVGGLPRVQELFEARVPRNTAPIADVSGRIRLEESDKFYKITIVPDDGGEEVVYD
KISRRQRLKVFKHDDGSERLLADGDHVEVGQQLMEGSANPHEVLRVQGQRSVQQHLVNEV
QEVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGSTEFLPGSLTERAEFESENRRVVAEGG
EPAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIGKLI
PAGTGIDRYRNIQVQPTEEARAAAYTIPSYEDQYYSPDFGQASGAAVPLDDYGFSDYR
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccgcatcggtctggcgaccgcggacgacatc
cgcaactggtcctacggcgaggtcaagaagccggagaccatcaactaccgcacgctgaag
ccggagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcgtctgcgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcgccgcgagcggatgggccacatcgagctggccgcgccg
gtcacgcacatctggtacttcaagggcgtgcccagccggctcggctacctgctcgacctg
gcgcccaaggatctcgagaagatcatctacttcgcggcctacgtcatcaccgacgtggac
aacgagatgcggcacaacgagctgtcgacgctcgaggccgagatggtcgtcgagaagaag
gccgtcgaggaccagcgtgacctggacctggccgagcggagccagaagctcgaggccgac
ctggccgagctggagcgcgacggcgccaagagcgacgtgcggcgcaaggtgcgcgacggt
ggcgagcgcgagatgcgtcagctccgggaccgggcccagcgcgagctggaccggctcgac
gagatctggacgacgttcaccaagctggctcccaagcagctgatcgtcgacgaggtgctc
taccgcgagctgcaggaccgctacggcgagtacttcaccggcgccatgggtgcggagtcg
atcaagaagctcatcgagaccttcgacatcgaggccgaggcggagtcgctgcgcgacacc
atcaagaacggcaaggggcagaagaagctccgtgcgctcaagcggctcaaggtcgtcgcg
gcgttccagcagtccggcaactcgccgctcggcatggtgctcgacgccgtcccggtgatc
ccgccggagctgcgcccgatggtgcagctcgatggtggccgcttcgcgacgagcgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccggttgaagcgactgatcgacctc
ggcgcgcccgagatcattgtcaacaacgagaagcgcatgctgcaggagtcggtggacgcg
ctgttcgacaacggccgccgcggccgtccggtcaccggaccgggcaaccgtccgctcaag
tcgctgtccgatctgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgccgaagctgatggcgctcgagctgttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtggagcgtcagcgt
ccgcaggtgtgggacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgc
gcaccgacgctgcaccgcctgggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagctgcacccgctggtctgcgaggcgttcaacgcggacttcgacggtgaccag
atggccgtgcaccttccgctgagcgcggaggcgcaggccgaggcgcgcatcctgatgctg
tcgtccaacaacatcctgtccccggcgtccggcaagccgctggccatgccgcgtctggac
atggtgacgggcctgtactacctgaccaccctcatcgagggcgacacgggcgagtacacg
ccggccgccaaggatgctccggaggagggcgtctacagcagcccggccgaggccatcatg
gcccgcgacctgggtgcgctgtcggtgcgggcgaagatcaaggtgcgcctgacgcacctg
cgtccgtcggccgccaaggaagccgagctgttcggcgacgagggctggaagccgggcgac
gcctggaccgccgagaccacgctgggtcgcgtgctgttcaacgagctgctgccgaagggc
tacccgttcgtcgacgagcagatgcacaagaaggtccaggcccggatcatcaacgacctg
gccgagcgctacccgatgatcgtcgtggcgcagaccgtcgacaagctcaaggacgccggc
ttctactgggcgacccgctcgggtgtcaccgtgtcgatggccgacgtgctggtgccgccg
cagaagcaggagatcctggagcggcacgaggccgaggccgactcgatcgagaagcagtac
cagcgcggcaagctcaaccacgaggagcgcaacggcgagctggtcaagatctggcagaag
gccaccgaagaggtcggtgaggcgctcgaggcgtactacccgtccgacaacccgatcatc
acgatcgtgaagtccggtgccacgggcaacctgacccagacccgcacgctcgcaggcatg
aagggtctggtgaccaacccgaagggcgagtacatcccgcgtccgatcaagtcctcgttc
cgcgagggcctgacggtgctggagtacttcatcaacacccacggtgcccgcaagggtctg
gccgacaccgcgctgcgtaccgccgactcgggttacctgacccgtcgtctggtggacgtc
agccaggacgtcatcgtccgcgagaccgactgcgacaccgagcgcggcatcgccgtcacg
ctcgccgagcaggacgccaccggcgccctgatccgggacgcgcacgtcgagaccgcggcg
ttcgcccgcaccctggccagtgacgcggtcgacgagaacggcaccgtgatcgtcgagcgt
ggccacgacctgggcgacccggcgatcgacgcgctgctcgcggcggggatctcgcaggtg
cgggtgcgttcggtgctcacgtgcgccagcgcggccggcgtctgcgcgatgtgctacggc
cgctcgatggcgacgggcaagctcgtcgacatcggcgaggccgtcggcatcgtcgccgcg
cagtccatcggtgagcccggtacgcagctgaccatgcgtaccttccaccagggtggcgtc
acgggcggcgccgacatcgtcggtggtctgccccgtgtgcaggagctgttcgaggcccgc
gtgccgcgcaacaccgcgccgatcgcggacgtctcgggccggatccggctggaggagagc
gacaagttctacaagatcacgatcgtgccggacgacggtggcgaggaagtggtctacgac
aagatctctcgccgccagcgcctgaaggtgttcaagcacgacgatggcagcgaacgcctc
ctggccgacggtgaccacgtcgaggtcggccagcagctgatggagggttcggccaacccg
cacgaggttctccgcgtgcagggtcagcggagcgtccagcagcacctcgtcaacgaggtg
caggaggtctaccgcgcccagggtgtgtcgatccacgacaagcacatcgaggtcatcgtc
cggcagatgctgcgtcgcgtcacgatcatcgactcgggctcgacggagttcctgcccggc
tcgctgaccgagcgtgcggagttcgagtcggagaaccgtcgcgtcgtggccgaaggtggc
gagcccgccgccggacgcccggtgctgatgggcatcacgaaggcatcgctggccaccgat
tcgtggctgtcggcggcgtcgttccaggagaccacccgcgtgctgaccgatgcggcgatc
aactgccgcagcgacaagctgcagggtctgaaggagaacgtgatcatcggcaagctgatc
ccggccggcaccggcatcgaccggtaccggaacatccaggtgcagccgaccgaggaggct
cgggccgccgcgtacacgatcccgtcctacgaggatcagtactacagcccggacttcggt
caggcgtcgggcgctgcggtgccgctggacgactacggtttcagcgactaccggtag
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integrated database retrieval system
