Mycolicibacterium grossiae: FZ046_13560
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Entry
FZ046_13560 CDS
T06593
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mgro
Mycolicibacterium grossiae
Pathway
mgro03420
Nucleotide excision repair
mgro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FZ046_13560
03430 Mismatch repair
FZ046_13560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgro03400
]
FZ046_13560
Enzymes [BR:
mgro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FZ046_13560
DNA repair and recombination proteins [BR:
mgro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FZ046_13560
MMR (mismatch excision repair)
Other MMR factors
FZ046_13560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QEM45661
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All DBs
Position
2831323..2834679
Genome browser
AA seq
1118 aa
AA seq
DB search
MTPRFSPTDLAEALGIFAPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY
ARPGEVLGLTFTRKAAGQLLRRVRTRLARLAGAGLMPGDDVADEHPTVSTYHAFAGTLLR
EHGLLLPVEPATRLISETELWQLAFRVVCEHPERLELAKSPATVTDMVLRLASQLAEHLV
DTAELRDTHAELERLVLTLPAGPGQRDRGPTQALLKMLAAQTERTELIPLVDALHARMRA
DHVMDFGMQMSAAARLAARFPQVGAELRSRYRVVLLDEYQDTGHAQRVALSALFGGGADD
DLALTAVGDPIQSIYGWRGASATNLPRFTTDFPRADGSPAPTLELRTSWRNPPRALRLAN
AVSAEARRRSVSVRELLPRPDARPGTIRCALLSDVAAERDWVADEVARRWHAALDAEEPV
PTAAVLVRRNADAAPMAEALTTRGVPVEVVGLAGLLSIPEVADVVAMLRLAADPTAGPAA
MRVLTGPRWRLGAADVVALWRRAVELDGGGRAADATVADIVAEAASDADTACLADAICDP
GAPQRYSADGHERVVALGRELTALRAQLHHPLPDFVAEVRRLLGVDAEARARQPVASGWT
GTEHLDAFADVVADFAARSSESVPGLLAFLDAAMTVENGLAPAEVTVARDRVQVLTVHAA
KGLEWEVVAVPHLSARVFPSTALARTWLTDAADLPPLLRGDRATESEHGVPVLDTSDVTD
RKMLGDRIAAHKKSLDQRRVDEERRLLYVAITRAEDTLLISGHHWGATELTPRGPSDFLT
EIRDVLVAADAAGEPCGEIVQWAPAPADGEPNPLKDQMIERTWPPVAPTAADDDVRRGAE
LVTAAMAAGPVQAGALEGRLDDPDDPDGDAPDVADPDVADPEGWAADVDALLAERARGRD
LPPVALPGQLSVSAVVDLGRDPAGAAERLRRRLPVRPDRHAALGTAFHDWVQRFFHAERL
FDLDDLPGAVDGELARADAEHLAELQAAFAVSPWATRTPVDVEAPFDVVIGGTVVRGRID
AVFADPDGGVTVVDWKTGDEPNEPKDLQHRAIQLAIYRLAWAAMHGVDPETVRAAFHYVR
SGTTVVPADLPDAEAIAGLLAAADPARAVSSGERCGTP
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
gtgacgccgcgcttcagccccaccgacctcgccgaagcgttgggcatcttcgccccgacc
gacgagcaggccgcggtgatcgcggcgccgcccgggccgctggtggttatcgccggcgcg
ggggccggcaagaccgagacgatggcggcgcgggtggtctggctggtcgccaacggctat
gcgcgtcccggagaagtgttgggcctcaccttcacccgcaaggcggccggtcagctgctg
cgccgcgtgcgcacgcgactggcccggctggccggtgcgggtctgatgcccggggacgac
gtcgccgacgaacaccccacggtcagcacctatcacgcgttcgcgggcacgctgctgcgt
gagcacggcctgttgctcccggtcgaaccggcgacgcggctcatcagcgagacggagctg
tggcagttggcgttccgcgtcgtctgcgagcacccggagcgcctcgagctggccaagtcg
ccggcgacggtcaccgacatggtgctgcgcctggcctcgcagttggccgagcacctggtg
gacaccgccgagctgcgcgacacccacgccgagctggagcgcctggtgctgacgctgccc
gcgggccccggccagcgcgaccgcggtcccacgcaggcgctgctgaagatgctcgccgcg
cagaccgagcgcaccgaactcattccgctggtcgatgcgctgcacgcccgcatgcgcgcc
gaccacgtcatggacttcggcatgcagatgtcggccgcggcgcggctggccgcgcggttc
ccgcaggtcggtgccgagctgcgcagccgttaccgggtggtgctgctcgacgagtaccag
gacaccggacacgcgcagcgggtggcgctgtcggcgctgttcggcggcggcgcggacgac
gacctcgccctcaccgcggtcggcgacccgatccagtccatctacggttggcgcggcgcc
tcggccacgaacctgccgcgcttcaccacggacttcccgcgcgccgacggcagcccggcg
cccacgctcgagctgcgcaccagttggcgcaacccgccgcgcgcgctgcgtctcgccaac
gcggtgtcggccgaggcgcggcgccggtcggtgtcggtgcgggaactgctgccgcgtccc
gacgcccggcccggcacgatccggtgcgccctgctgtccgacgtggcggccgaacgcgac
tgggtcgccgacgaggtcgcccggcgctggcacgccgcgctcgacgccgaggagccggtg
cccactgccgcggtgctggtgcgccgcaacgccgacgccgcgccgatggcggaggcgctc
accacccgcggcgtgccggtcgaggtggtgggcctggccggtctgctgtcgatccccgag
gtggccgacgtcgtcgcgatgctgcggctggccgccgacccgaccgcgggcccggccgcg
atgcgggtgctgaccgggccgcgctggcggctgggcgccgcggacgtcgtggcgctgtgg
cgtcgcgccgtcgaactcgacggcggtggacgggcggccgacgcgaccgtcgccgacatc
gtcgccgaggccgcttccgacgccgacaccgcgtgcctcgccgacgccatctgcgatccc
ggagcgccacaacggtattcggccgacggtcacgagcgggtggtcgcactgggccgcgaa
ctgaccgcgctgcgcgctcaactgcaccatccgctgcccgacttcgtcgccgaggtgcgc
cgcctgctgggcgtcgacgccgaggcgcgtgcccggcagccggtggcatccggctggacg
gggaccgagcacctcgatgccttcgccgacgtggttgccgatttcgccgcgcgctcctcg
gagtcggtgcccggactgctcgcgttcctcgacgcggcgatgacggtcgagaacggcctg
gcgcccgccgaggtgacggtggcccgcgaccgcgtgcaggtcctcaccgtgcacgcggcg
aagggcctcgagtgggaggtcgtcgccgtgccgcacctcagcgcccgggtgttcccgtcg
acggcgctcgcccgcacctggctgaccgacgccgccgacctgccgccgctgctgcgcggt
gaccgggccaccgagtccgagcacggcgtaccggtgctcgacacctccgacgtgaccgac
cgcaagatgctcggcgaccgcatcgccgcgcacaagaagagcctcgaccagcgacgcgtg
gacgaggagcgccgcctgctctacgtcgcgatcacccgcgccgaggacacgctgctgatc
tccggacaccactggggtgccaccgaactcacgccccgcggaccgtcggacttcctcacc
gagatccgcgacgtcctggtggcggccgacgccgcgggcgagccgtgcggcgagatcgtc
cagtgggcgccggccccggccgacggcgaaccgaatccgctgaaggatcagatgatcgag
cggacctggccgccggtcgcaccgacggccgccgacgacgacgtccgccgcggcgcagag
ctggtcaccgcggcgatggctgcggggccggtgcaggccggggcactcgaggggcgcctc
gacgatcccgacgacccggacggcgacgcccccgacgtcgctgaccccgacgtcgctgac
cccgagggctgggccgccgacgtggatgcgctgctcgccgagcgggcacgcggccgcgac
ctgccgccggtcgctttgccggggcagctgtcggtgagtgcggtggtggacctcggccgc
gacccggcgggcgcggcggagcggctacgccgacggctgccggtccgtcccgatcggcac
gccgcgctgggcaccgcgttccacgactgggtgcagcggttcttccacgccgagcggctg
ttcgacctcgacgacctgcccggcgcggtcgacggcgaactggctcgcgccgacgcggag
cacctggccgagctgcaggcggcgttcgcggtgtcgccgtgggccacccgcacaccggtc
gacgtcgaggcgccgttcgacgtcgtgatcggcggcaccgtggtgcgcggccggatcgac
gccgtgttcgccgaccccgacggcggcgtcaccgtcgtcgactggaagaccggggacgag
ccgaacgagccgaaggacctgcagcacagggcgatacagctggcgatctaccggctggcg
tgggccgcgatgcacggcgtcgaccccgagacggtgcgtgcggcattccactacgtgcgc
agcggcaccaccgtggtgcccgcggacctgcccgacgccgaggcgatcgccggcctgctc
gccgcggccgacccggcgcgcgccgtcagttccggggagcggtgcggtacaccttga
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