Mycolicibacterium grossiae: FZ046_22230
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Entry
FZ046_22230 CDS
T06593
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mgro
Mycolicibacterium grossiae
Pathway
mgro03030
DNA replication
mgro03430
Mismatch repair
mgro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mgro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FZ046_22230
03430 Mismatch repair
FZ046_22230
03440 Homologous recombination
FZ046_22230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgro03032
]
FZ046_22230
03400 DNA repair and recombination proteins [BR:
mgro03400
]
FZ046_22230
Enzymes [BR:
mgro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FZ046_22230
DNA replication proteins [BR:
mgro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FZ046_22230
DNA repair and recombination proteins [BR:
mgro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FZ046_22230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QEM48471
LinkDB
All DBs
Position
4624734..4626632
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AA seq
632 aa
AA seq
DB search
MSVPRPTVTVMGRPRPDESAQLALDDLDADAGLPSLRDVTFVVVDLETTGGRNSESAPGR
GDHDQITEIGAVKVRGGEVIGELATLVDPGRSIPPQIVALTGITTAMVCDAPRIESVLPS
FLEFSRGAVLVAHNAGFDIGFLRAAAQRCDLVWPKPPVLCTVKLARRVLTRDEAPSVKLS
ALARLFDASTTPTHRALDDARATVDVLHALIERVGNQGVHTLAELRSYLPDVTPAQRSKR
HLAAGLPQAPGVYQFRGPSDEVLYVGTAVDLRRRVRQYFNGADPRTRMKEMVALATRVEH
VECAHDLEAGVRELRLLAAHAPPYNRRSKFPHRWWWVTLTDEPFPRFSVVRAPTHDLVIG
PFRVRADAAETAEVLARFTGVRSCGKRLARSARHGPACPERELSPCPAARDVSAEQYAPT
AAGAHRLIAGVEHGALRTALAHVEDLAARGRYETAARLRDHVATAIEALWRGQRLRALAA
VDELVAARSDGAGGWHLVVVRRGQLGAAGTARRGVPPMPVVDAICAAAQTILTAPAPLGG
ALVEETALIARWLVGPGVRIVRVESSSGDGWASPVGAAGALAPWAALARSARAADRRYAE
DPFDDRYGVTPVPRPRNPERVVGAPMSLRPSG
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcccgcggcctacggtcaccgtcatgggtcgcccccgccccgacgagtccgcc
cagttggcgctcgacgacctcgacgccgacgccggcctgccgtccctgcgggacgtcacg
ttcgtcgtcgtcgacctcgagaccaccggagggcgcaactccgagagcgcgccgggccgc
ggcgaccacgaccagatcaccgagatcggcgcggtcaaggtgcgcggcggtgaggtgatc
ggcgaactcgcgacgctcgtcgacccgggacggtccatcccgccccagatcgtcgcgctc
accggcatcaccaccgccatggtgtgcgacgcgccgcgcatcgagtccgtgctgccgtcg
ttcctcgaattctcgcgtggcgcagtgctcgtcgcgcacaacgcgggcttcgacatcggg
ttcctccgcgccgccgcgcagcgctgcgacctcgtctggcccaagcccccggtgctgtgc
acggtcaagttggcccgccgcgtgcttacccgcgacgaggcgccgagcgtcaagctctcc
gcgctggcccggttgttcgacgcgagcaccacgccgacccaccgcgccctcgacgacgcg
cgcgccaccgtcgacgtgctgcacgcgctcatcgagcgcgtcggcaaccagggcgtgcac
accctcgccgaactgcgctcctacctgcccgacgtcacccccgcacagcgcagcaagcgg
cacctcgccgccggcctgccgcaggcgcccggggtgtaccagttccgcggtccgtcggac
gaggtgctgtacgtcggcacggcggtcgacctgcgccgccgggtccggcagtacttcaac
ggcgccgacccgcgcacccggatgaaggagatggtggccctggccacccgcgtcgagcac
gtcgagtgtgcgcacgacctggaggcgggcgtccgtgagctgcgcctgctcgcggcgcac
gcgccgccctacaaccggcggtcgaagttcccgcaccgctggtggtgggtgacgctgacc
gacgagccgttcccgcggttctccgtcgtccgcgcacccacccacgacctggtgatcggc
ccgttccgggtgcgcgcggacgcggcggagaccgccgaggtgcttgcacggtttaccggc
gtgcgcagctgcggcaagcggctggcccgctcggcccggcacgggcccgcctgtccggag
cgcgagctgtcgccgtgcccggcggcccgcgacgtctcggccgagcagtacgcgccgacg
gccgccggcgcccaccggctcatcgccggcgtcgagcacggcgcgctccggaccgccctg
gcccacgtcgaggacctcgcggcgcggggacgctacgagaccgcggcgcggctgcgcgat
cacgtagcgaccgcgatcgaggcgctgtggcgcggtcagcggctgcgcgccctggcggcc
gtcgacgagctggtggccgcgcgctcggacggagcgggcggctggcacctggtggtcgtc
cggcgggggcagctcggcgccgcggggacggcgcgccgcggcgtcccgcccatgccggtc
gtggacgccatctgcgcggccgcgcagaccatcctgaccgctcccgcaccgctgggcggt
gccctggtcgaggagacggcgctcatcgcgcggtggctcgtcgggccgggcgtccggatc
gtgcgcgtggagtcgtcctcgggcgacggctgggccagcccggtgggcgcggccggtgcg
ctcgccccgtgggccgcactcgcgcggtcggcgcgtgccgccgaccggcgctacgccgag
gacccgttcgacgaccgctacggcgtcacgccggtcccacgaccacggaaccccgaacgc
gttgtcggagcgccgatgtcgctgcgtccgtccggctga
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