Mycolicibacterium grossiae: FZ046_23445
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Entry
FZ046_23445 CDS
T06593
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mgro
Mycolicibacterium grossiae
Pathway
mgro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FZ046_23445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgro03019
]
FZ046_23445
03009 Ribosome biogenesis [BR:
mgro03009
]
FZ046_23445
Enzymes [BR:
mgro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
FZ046_23445
Messenger RNA biogenesis [BR:
mgro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FZ046_23445
Ribosome biogenesis [BR:
mgro03009
]
Prokaryotic type
rRNA processing factors
FZ046_23445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QEM48499
LinkDB
All DBs
Position
complement(4890038..4892836)
Genome browser
AA seq
932 aa
AA seq
DB search
MAVQPDPADAVEQPADEAEQPADEAEQPADEAEQPAADDAADEPPADEAAQPVEDPEAEP
ESRLLLETPPPAAAAPVADYLPLFVAPQPVTYAPRDEDTDDDEDDEDTDDASGDDDSDDG
SDRPANRRRRRGRRGRGRGRGEQASDDGADNDDDATDATADADSDSDEGDEDDGDEDNGT
GEGASRRRRRRRRRKSGSSDGGDGNGAEASPDDPPNTVVHERAPRERSEKSSKSDEIQGI
SGSTRLEAKRQRRRDGRDAGRRRPPILSEAEFLARREAVERVMVVRDKVRTEPPHEGARY
TQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEV
NWEAAGLGGAQRKIEQALKPGDYVVVQVSKDPVGHKGARLTTQVSLAGRYLVYVPGASST
GISRKLPDTERQRLKEILKEVVPSDAGVIIRTASEGVKEEDIRTDVNRLQERWNQIEAKA
TEITGKAAGAAVALYEEPDVLVKVIRDLFNEDFSGLVVSGDDAWKTINDYVQSVAPELLE
RMTKFEPAGGAGGPDVFAVHRIDEQLTKALDRKVWLPSGGTLVIDRTEAMTVVDVNTGKF
TGSGGNLEQTVTRNNLEAAEEIVRQLRLRDIGGIVVIDFIDMVLESNRDLVLRRLTEALA
RDRTRHQVSEVTSLGLVQLTRKRLGTGLIEAFSTTCSHCGGRGIVLHGDPVDSAPSGSSG
RKSESGGGGGGGGRRGKRGKKNGRSEDVPVAKVPSHAAGEHPMFKAMAAANGKHDEDDED
DGTDTDVEDADESTVIGEGAADDAERLVDDTDEESDDTDDEDATLDDEDSDDDDSDDDDS
DDDDSDDDEDDDIEVIDRDEDSDDEDSDDEDSDDDEDSDDDYSDDEEDDEDDDDSDDEDS
DDEDEDEPVVVTARPRRRRAAARPAGPPAHDG
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
gtggccgttcagccggatccggcagacgccgtcgaacagcccgccgacgaggccgaacag
cccgccgacgaggccgaacagcccgccgacgaggccgaacagcccgccgccgacgacgct
gccgatgagcctcctgccgatgaggccgcccagcccgtcgaggatcccgaagcggagccg
gagtcccggctgctgctcgagaccccgccgcccgccgccgccgcgccggtcgccgactac
ctcccgctgttcgtggcgccgcagcccgtgacgtacgcgccgcgcgacgaggacaccgac
gacgacgaggacgacgaggacaccgacgacgcgtccggtgacgacgactccgacgacggc
tccgaccggcccgccaaccgccggcgccgacgtggccgccgcggacgtggtcgcggccgg
ggcgaacaggcctccgacgacggcgccgacaacgacgacgacgccaccgatgcgactgcc
gacgcggactcggactccgatgagggtgacgaggacgacggcgacgaggacaacggcacc
ggcgagggcgccagccgccgtcgtcgccgccgccgtcggcgcaagtccggctccagcgat
ggcggcgacggcaacggcgccgaggcgtcgccggacgacccgcccaacaccgtcgtgcac
gagcgtgccccgcgcgagcgctcggagaagtcctcgaagtccgatgagattcaaggcatc
tccgggtccacccgcctcgaggcgaagcgccagcgccgccgcgacggacgcgatgccgga
cgccgccgcccgccgatcctgagcgaagcggagttcctggcccgtcgcgaagccgtcgag
cgcgtcatggtggtgcgcgacaaggtccgcaccgagccgccgcacgaaggcgcccgctac
acccagatcgccgtgctcgaggacggcgtcgtggtcgagcacttcgtgacgtccgcggcg
tcggcgtcgctggtcggcaacatctacctcggcatcgtgcagaacgtgctgccctcgatg
gaggcggcgttcgtcgacatcggccgcggccgcaacggcgtgctctacgccggcgaggtc
aactgggaggccgccgggctcggcggcgctcagcgcaagatcgagcaggccctcaagccc
ggcgactacgtcgtcgtgcaggtcagcaaggacccggtgggtcacaagggcgcgcggctg
accacgcaggtgtcgttggccggccgctacctcgtctacgtgcccggtgcctcgtcgacc
ggcatcagccgcaagctgcccgacaccgagcggcagcggttgaaggagatcctcaaggaa
gtcgtcccgtcggacgccggcgtcatcatccgcaccgcctcggagggcgtgaaggaagaa
gacatccggaccgacgtcaaccggttgcaggagcgctggaaccagatcgaggccaaggcc
accgagatcaccgggaaggccgccggcgccgccgtggcgctgtacgaggagcccgacgtc
ctggtcaaggtgattcgcgacctgttcaacgaggacttctccggtctcgtcgtctccggc
gacgacgcctggaagaccatcaacgactacgtccagtccgtggcgcccgaactgctggag
cggatgacgaagttcgaacccgccggcggtgccgggggaccggacgtcttcgccgtgcac
cgcatcgacgaacagctgaccaaggccctggaccgcaaggtctggctgccgtccggcggc
acgctggtcatcgaccgcaccgaggcgatgacggtggtcgacgtcaacaccggcaagttc
accggctcgggcggcaacctcgagcagaccgtcacccgcaacaatcttgaggccgccgag
gagatcgtgcgccagctgcggttgcgcgacatcggcggcatcgtggtcatcgacttcatc
gacatggtgctcgagtcgaaccgcgacctggtgctgcgccggctcaccgaggcactcgcc
cgggaccgcacccgccaccaggtgtccgaggtgacctccctgggtctggtccagctgacg
cgcaagcgcctgggcaccgggctgatcgaggcgttctcgaccacgtgttcgcactgcggc
gggcgcggcatcgtgctgcacggcgacccggtggactccgcgccgtccggatcgtcgggc
cgcaagtcggagtccggtggtggcggcggcggtggtggtcggcgcggcaagcggggcaag
aagaacggccgcagcgaggacgtccccgtggccaaggtgccctcgcacgccgccggcgag
catccgatgttcaaggccatggcagccgccaacggcaagcacgacgaggacgacgaggac
gacggcaccgacaccgatgtcgaggatgccgacgagtcgacggtgatcggcgagggcgcg
gcggacgacgccgaacgcctcgtcgacgacaccgacgaggagtccgacgacaccgacgac
gaggacgcgaccctcgacgacgaggactcggatgacgacgactccgatgatgacgactcg
gatgatgacgactcggatgacgacgaggacgacgacatcgaggtcatcgaccgcgacgag
gattccgacgacgaggactccgacgacgaggactccgacgacgacgaggactccgacgac
gactactccgatgacgaagaagacgacgaggacgacgacgactcggacgacgaggattcg
gacgacgaggacgaggacgagcccgtggtcgtcaccgcgcgtccccgccgccgccgtgcg
gccgcgcgaccggcgggtccgccggcacacgacggctag
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