Magnetospirillum gryphiswaldense MSR-1: MSR1_01940
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Entry
MSR1_01940 CDS
T05662
Symbol
gmr_3
Name
(GenBank) Cyclic di-GMP phosphodiesterase Gmr
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_3
PAS_8
Response_reg
TadZ_N
PAS_12
PAS_13
Motif
Other DBs
NCBI-ProteinID:
AVM72715
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Position
187450..189936
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AA seq
828 aa
AA seq
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MEPGGQRSGCTVLVVEDNPGDARLVELYLLEDITSPFRVLKAELLSAALGLLDANIIDVV
LLDLSLPDSFGMDTLDRLRAAHPLVPVVVLTGTNDEALALQALRQGAQDYLVKGQGDGNL
VRRAIFYAIERSHAASALKRSEGRFRALFANAGLGVVLADAHGRMVEANPAFLSMVGYGE
VELRGEKFRDITHPDDIGLNDTLRAEVLDGSRDGFQLTKRYIAKDGRIIWAKLTCTVMRE
ADGQQPFTVTVVEDITERKRLEDNMRLAATVFENSGDGLFVTDAENRIIHVNPAFTRITG
FTADEVLGRNPRLLASGRHDHDFFIQLWTVLLRDGKWQGEIWDRRKDGEMFAGWQNIAVV
RDTDGKVQNFVAVISDITTRKQVEERLSYAANHDPLTRLPNRTLFQERLTRAIARASRNH
NLVALLFIDLDRFKQVNDTMGHLAGDMLLQQVAERLSSCIRQGDTVARLSGDEFTIILED
VQDPRDAAVVGHKVLRLLQEPVALTGGEAHISSSIGVSLYPTDAGDPQTLLKLADAAMYR
AKHLGRNSCQFHSEAVNAEAFERLALENALRGAVDQGQFLLHYQPIFDVKSGRAVAVEAL
LRWRHPEVGVVAPNQFLALAEETGMIVPIGRWVFDQACRQAKLWRDAGHVDLRLHINLSP
RQLRQPDLIEMVAAALEVSQLPPQALVLEVMETCVIDKAFDPSALFARFAALGVGLAIDE
FGSGYSSFAFLRRLPVTILKVAQSFVRNLSSSEDESEIVTAIVALARGLHMTVVAPGIEN
KAQLDFLTGFGCDKVQGFLLSKPLPGTEMTEFLDLKRSPAALGPWGNP
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggaggccaacgctccggctgtaccgtcctggtggtcgaggataatccaggc
gacgcccggctggtcgagctttatctgcttgaagacattacctcgccgtttcgcgtgctg
aaggcggaattgctgtcggcggcgcttggccttcttgatgccaacatcatcgacgtcgtg
ctgctggacctgtccttgcccgattctttcggcatggataccttggaccgcctgcgcgcc
gcccatcctttggtgccggtggtggtgctgaccggcaccaacgatgaggctctggcgctt
caggccctgcgccagggcgcccaggattatctggtcaaggggcaaggcgacggcaatctg
gtgcgccgggccattttctatgccatcgagcggtcccatgcggccagcgcgctgaaacgg
tcggaagggcggttccgcgcgcttttcgccaatgcgggcctgggcgtggtgctggccgac
gcccatggccgtatggtcgaggccaatcccgcctttttatccatggtcggctatggcgag
gtggaattgcgcggggaaaaattccgcgacatcacccatcccgacgatatcggcttgaat
gatacgctgcgggccgaggtgctggacggcagccgcgacggcttccaactgaccaagcgc
tatatcgccaaggacgggcgcatcatctgggccaagctgacctgcacggtgatgcgcgag
gccgatggccagcagcctttcaccgtcaccgtggtcgaggacatcaccgagagaaagcgc
ctggaagacaatatgcgtctggcggcgacggtgttcgagaattccggcgacggtctgttc
gtcaccgacgccgaaaaccggatcatccacgtcaatccggccttcacccgtatcaccggc
ttcaccgccgacgaggtgttgggccgcaatccccgactgttggcctcggggcggcacgac
cacgattttttcatccagttgtggaccgtcttgctgcgcgacggcaagtggcagggcgaa
atctgggatcgccgcaaggacggcgaaatgttcgccggttggcaaaatatcgccgtggtc
cgcgataccgacggcaaggtgcagaatttcgtcgccgtcatcagcgacatcaccacgcgc
aagcaggtggaggaacggctgtcctatgccgccaaccacgatccgctgacccggttgccc
aatcgcaccttgttccaggaacgcctgacccgagccatcgcccgagcctcgcgcaatcat
aatctggtggcgctgctgttcatcgacctggaccggttcaagcaagtcaacgacaccatg
ggccatctggccggcgacatgctgttgcagcaggtggcggagcggctgtcgtcgtgcatc
cgccagggtgacacggtggcgcggctgtcgggcgacgaattcaccatcatcttggaagac
gtccaagacccccgtgacgcggcggtggtcgggcacaaggtgttgcgcctgttgcaagag
ccggtcgccttgaccggtggcgaggcgcatatcagttcctccatcggcgtatcgctttac
ccgaccgatgccggcgatccacagaccttgctgaagctggccgatgccgccatgtatcgg
gccaagcatctgggccgcaattcctgccagttccattccgaggcggtcaacgccgaggcg
ttcgagcgtttggcgctggaaaacgccctgcgcggtgccgtcgatcagggccagttcctg
ttgcattaccagcccatcttcgacgtcaagagcggtcgtgcggtggcggtcgaggccttg
ctgcgctggcgtcatccggaagtgggggtggttgcccccaaccaattcctggccttggcc
gaggaaaccggcatgatcgttcccatcggacgctgggtgttcgaccaggcctgccgtcag
gccaagctttggcgtgatgccggccacgtggatttgcgcctgcacatcaacctgtcgcca
cgccagttgcgccagcccgatctgatcgaaatggttgccgccgccttggaggtgtcgcaa
ttgccgccccaggccctggttctcgaggtgatggaaacctgtgtcatcgacaaggctttt
gacccctcggcgctgttcgcccgcttcgccgccctgggggtggggttggccatcgacgaa
tttggttcgggctattcgtccttcgccttcctgcgccgcttgccggtgaccatcttgaag
gtggcgcaaagcttcgtccgcaacctgtccagttccgaggacgaatccgagatcgtcacc
gccatcgtcgccctggcccgtggcctgcacatgaccgtggtggccccggggatcgagaac
aaggcgcaactggatttcctcaccggcttcggctgcgacaaggtccagggcttcttgctg
tccaaacccttgccggggactgaaatgaccgagtttctcgaccttaagcgttcgcccgcc
gccttgggtccatggggcaatccatga
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