Magnetospirillum gryphiswaldense MSR-1: MSR1_06260
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Entry
MSR1_06260 CDS
T05662
Symbol
rpoH_1
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgry03021
]
MSR1_06260 (rpoH_1)
Transcription machinery [BR:
mgry03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MSR1_06260 (rpoH_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
LysM
Sigma70_r3
UCR_14kD
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AVM73137
LinkDB
All DBs
Position
complement(622689..623555)
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AA seq
288 aa
AA seq
DB search
MTAIPTSLSLAPEGNLSRYLQEIRKFPMLEPTEEYQLAKRYREHGDFEAADRLITSHLRL
VAKIAMGYRGYGLPLGELISEGNVGMMQAVKRFDPDRGFRLATYAMWWIRAAVQEYILHS
WSLVKMGTTAAQKKLFFNLRKLKGQMQAMDEGDLPQETVTSIATKLNVPENDVINMNRRL
ASPDHSLNAPVRMDGEGEWQDWLVDESDDQETELADRQERGIRSKLLSTALDTLNERERS
ILSQRRLTEDPATLEDLSQQYGISRERVRQIEVRAFEKLQKSIRASVA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaatccccacctccctgtcgctggccccagagggcaacctctcgcgctacctg
caggaaatccgcaagttccccatgctggaaccgacagaggaataccagctggccaagcgt
taccgtgaacacggcgacttcgaggccgccgaccgcctgatcaccagccatttgcgtctg
gtcgccaagatcgccatgggctatcgcggttatggcctgccgctgggcgagctgatttcc
gaaggcaatgtggggatgatgcaggcggtcaaacgcttcgaccccgatcgcggcttccgt
ctggccacctatgccatgtggtggattcgggcggcggtgcaggaatacatcctgcattcg
tggtcgctggtgaagatgggcaccaccgccgcgcagaaaaagctgttcttcaacctgcgc
aagctgaagggccagatgcaggccatggacgaaggcgatctgccgcaggaaacggtgacc
tccatcgccaccaagctgaacgtgccggaaaacgacgtcattaacatgaaccgtcgtctg
gccagccccgatcactcgctgaacgcgccggtgcgcatggatggcgagggagagtggcag
gattggctggtggatgaaagcgacgatcaggaaaccgaactggccgaccgccaggaacgc
ggcatccgcagcaagctgctctccaccgcccttgataccctgaacgagcgtgaacgctcg
atcctgagccaacggcgactgacggaagacccggccaccttggaagacctgtcgcagcaa
tatggcatcagccgcgaacgggtgcgccagatcgaggtccgcgccttcgagaagctgcaa
aaaagcatccgcgccagcgtggcctga
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