Magnetospirillum gryphiswaldense MSR-1: MSR1_07040
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Entry
MSR1_07040 CDS
T05662
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MSR1_07040 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgry03400
]
MSR1_07040 (ruvB)
Enzymes [BR:
mgry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSR1_07040 (ruvB)
DNA repair and recombination proteins [BR:
mgry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MSR1_07040 (ruvB)
RecFOR pathway proteins
MSR1_07040 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_22
AAA_18
nSTAND3
AAA_17
Rad17
AAA_14
AAA_24
AAA_33
PEPCK_ATP
RNA_helicase
AAA_28
NB-ARC
TsaE
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AVM73210
UniProt:
V6EXY0
LinkDB
All DBs
Position
698992..700035
Genome browser
AA seq
347 aa
AA seq
DB search
MNDRMVAPQLNPGDVETHLRPQVLDDFIGQQAVRENLKIFISAAKARGEALDHTLFFGPP
GLGKTTLAQIVSRELGVGFRATSGPVIARAGDLAALLTNLEPRDVLFIDEIHRLNPAIEE
VLYPAMEDFQLDLIIGEGPAARSVRIDLPPFTLVGATTRSGLLTTPLRERFGIPCRMNYY
TPQELELIVARGARVLGFDVTPDGAAEVARRARGTPRVAGRLLRRVRDFAAVAGQSPVDA
QVADRALTRLEVDQMGLDAMDRRYLKCIADNYGGGPVGVDTLAAALSESRDTLEEVVEPY
LLQQGLIQRTPRGRMLSAAGFKHIGLNPPSEVLVQLDLLAQMGGDDE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccgcatggtcgctccccagctcaatccgggcgacgtggaaacccatctgcgt
ccgcaggtgctggacgatttcatcggccagcaggcggtgcgcgaaaatctgaagattttc
atttccgccgccaaggcgcgcggcgaggcgttggaccataccttgtttttcggtccgccc
ggtctgggcaagaccaccttggcccagatcgtgtcgcgggaattgggcgtgggctttcgc
gccacctcggggccggtgatcgcccgggccggcgatctggcggcgctcttgaccaatctg
gagcccagggacgttctgttcatcgacgaaatccaccgccttaatcctgccatagaggaa
gtgctctatcctgccatggaggactttcaactcgacctcatcatcggcgagggaccggcg
gcgcggtccgttcgtatcgatctgccgcccttcactttggtgggggcgaccacgcgctcg
ggcctgttgaccacgcccttgcgcgaacgcttcggcattccgtgccggatgaactactac
accccgcaggaactggaactgatcgtcgcccgtggcgcccgcgtgctgggtttcgacgtc
acccccgacggtgccgccgaagtggcgcgccgcgcccgcggtacgccgcgcgtggccggt
cgcctgctgcgccgggtgcgcgacttcgccgccgtcgccggtcaaagtccggtggatgcc
caggtcgccgaccgggcgttgacccggctggaagtggaccagatgggccttgatgccatg
gaccgccgctatctcaaatgcatcgccgacaattatggcggcgggccggtgggcgtcgat
accctggccgccgccctgtcggaaagccgcgacaccttggaagaggtggtggaaccctat
ctgctgcaacagggtctgatccagcgcaccccgcgcggacgtatgttgtcggcggcggga
ttcaagcatatcggcctcaatccgcccagcgaggtgctggtgcagttggacctgttggcg
cagatggggggcgacgacgaatga
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