Magnetospirillum gryphiswaldense MSR-1: MSR1_11630
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Entry
MSR1_11630 CDS
T05662
Symbol
tdcB
Name
(GenBank) L-threonine dehydratase catabolic TdcB
KO
K01754
threonine dehydratase [EC:
4.3.1.19
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00260
Glycine, serine and threonine metabolism
mgry00290
Valine, leucine and isoleucine biosynthesis
mgry01100
Metabolic pathways
mgry01110
Biosynthesis of secondary metabolites
mgry01200
Carbon metabolism
mgry01230
Biosynthesis of amino acids
Module
mgry_M00570
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MSR1_11630 (tdcB)
00290 Valine, leucine and isoleucine biosynthesis
MSR1_11630 (tdcB)
Enzymes [BR:
mgry01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.19 threonine ammonia-lyase
MSR1_11630 (tdcB)
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GFIT
Motif
Pfam:
PALP
ACT
ACT_4
ACT_AHAS_ss
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AVM73658
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Position
1151678..1152904
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AA seq
408 aa
AA seq
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MTVTIDQVRSAAAALDGSVALTPVVEAPKLAQLSGAAQVWLKLENLQHSGSFKARGALNR
ILALNTAERQVGVIAMSAGNHAQGVALHCARLGIPATVVMPRFTPLTKVQRTQAYGATVV
LVGETLAEAQQHAHILATEQGLIFIHPYDDPLIIAGQGTVGLELARQVIDADDVIIPIGG
GGLAAGMAIALHDAPTPPRLTGVQSASFPTLVRQPVADAPLSPQTLAEGIAVKYPGSLTK
PIIDQHFDDVFAVDDTAIEQAIVWLMEEQKIVAEGAGAAPLALLMTQSARFAGRKGVLVI
SGGNIDNRVMASILMRGLVRAGRLARLRIEISDAPGMLARATSLIAEHGGNILEVYHQRL
FQDVPVKSAELDVVVEATDSSHVEAMLGALRQAGFPARRLGSMASLPE
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgtaaccatcgatcaggtcagaagcgccgccgccgcccttgacggcagcgtcgcc
ctgaccccggtggtggaggcgcccaagctggcccagttgagcggagcggcgcaggtttgg
ctgaaactggaaaacctgcagcattccggctcgttcaaggcccgaggcgcgctcaaccgc
atcctggcgctgaatacggcagaacgacaagtcggcgtcatcgccatgtcggcgggcaac
cacgctcagggtgtcgccctgcattgcgcccggctggggattccggccacggtggtgatg
ccacgcttcaccccactgaccaaggtgcaacgcacccaagcctatggtgccaccgtggtg
ctggtcggcgaaaccctggccgaggcgcaacagcacgcccacatcctggcgaccgaacag
ggactgatcttcatccatccctatgatgacccgctgatcatcgccggccagggcaccgtc
gggctggaactggcccgacaggtcatcgatgccgacgatgtcatcattcccatcggcggc
ggcggtctggccgccggcatggccatcgccttgcacgacgcccccaccccgccccgcctg
accggagtacaaagcgccagcttccccaccctcgttcgtcaacctgtggctgacgccccg
ctttcaccccaaaccttggccgaaggcattgccgtcaaatatcccggcagcttgaccaag
ccgatcatcgaccagcatttcgacgacgtttttgccgtggacgacaccgccatcgaacag
gccatcgtttggctgatggaagaacagaagatcgtcgccgaaggcgccggggcagcaccc
ttggccctgctaatgacccaatcggcgcgttttgccgggagaaagggggttctggtcatt
tccggcggcaatatcgacaaccgggtcatggcctcgatcctgatgcggggacttgtgcgg
gccggtcgtctggcccgcctgcgcatcgagatcagcgacgctccgggcatgctggcccgc
gccaccagtctgatcgccgaacatggcggcaatatcctggaagtctatcaccagcgcctg
tttcaggacgtgccggtgaaaagtgccgaattggacgtggtggtcgaagccaccgattcc
agccacgtggaagccatgcttggcgccctgcgccaagccggttttccggcacgcaggttg
gggtccatggccagcctgccggaatga
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