Magnetospirillum gryphiswaldense MSR-1: MSR1_12690
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Entry
MSR1_12690 CDS
T05662
Symbol
rlmB_2
Name
(GenBank) 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mgry03009
]
MSR1_12690 (rlmB_2)
03016 Transfer RNA biogenesis [BR:
mgry03016
]
MSR1_12690 (rlmB_2)
Ribosome biogenesis [BR:
mgry03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MSR1_12690 (rlmB_2)
Transfer RNA biogenesis [BR:
mgry03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
MSR1_12690 (rlmB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Methyltrn_RNA_4
Motif
Other DBs
NCBI-ProteinID:
AVM73761
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All DBs
Position
1258135..1258881
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AA seq
248 aa
AA seq
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MAQPKLHRIGGLPAVAALFQRDPGRVERLFFNDRMKAEAQPLCQQMAAARKPFRHVPTEE
LTKVAGTPLHGGIVAVCQPKGLTPFEAVKSFNWAKAKEPLVILDGIGNPHNLGAIARTMA
FFGLGRLIVSDHPEQALPSDAAFRIAEGGLEWVDVYQVANLGKALPRLKPHYQVIGTALG
AHRSMKDTFSSNDKPLALVLGNEEEGLPATTLAACDDIVTIPGSGRVQSLNVSATAAILI
HLLAGGMG
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcccagccgaaactgcaccgcattggtggcctgcccgccgtcgccgccttgttccag
cgcgaccccgggcgggtcgagcggctgttcttcaacgaccgcatgaaagccgaagcccag
cccttgtgccagcagatggcggcggcgcgcaagccgttccgtcacgtccccaccgaggaa
ctgaccaaagtcgccggcacgcccctgcacggcggcatcgtcgccgtttgtcaacccaag
gggttgacgccgttcgaagcggtgaaaagcttcaactgggccaaggccaaggaaccgctg
gtcatcctggatggtatcggcaatccgcacaatctgggggccatcgcccggaccatggcg
tttttcggcctcggccgcctgatcgtctctgaccatccggaacaggcactgccgtcggat
gccgccttccgcatcgccgaaggcgggttggaatgggtggatgtctatcaggtcgccaac
ctgggcaaggcgcttccgcgtcttaaaccacattatcaagtcatcggcacagcgctggga
gcgcaccggtcgatgaaagacactttttcaagtaatgacaagccattggcgctcgttctt
ggcaacgaagaagaagggctgcccgccaccaccctggccgcctgcgacgacatcgtcacc
atccccggctctggccgggtgcagtcgctgaacgtgtcggccaccgccgccatcctgatc
catctgctggccggcggcatgggataa
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