Magnetospirillum gryphiswaldense MSR-1: MSR1_12980
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Entry
MSR1_12980 CDS
T05662
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00541
Biosynthesis of various nucleotide sugars
mgry01100
Metabolic pathways
mgry01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MSR1_12980 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mgry01005
]
MSR1_12980 (kdsA)
Enzymes [BR:
mgry01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
MSR1_12980 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
mgry01005
]
Lipid A
MSR1_12980 (kdsA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AVM73790
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Position
complement(1288434..1289279)
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AA seq
281 aa
AA seq
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MTHHHVAVGRTLVLGNDLPLVLIAGPCQMESREHALECAGALKDMCEKAGIGLIYKSSFD
KANRTSLSGRRGLGLEAALPVFAEIRESLGLPVLTDIHNEEQCIPVAKAVDVLQIPAFLC
RQTDLLVAAGRTGAVINVKKGQFLAPSQMANVAAKVESTGNSRILLTERGACFGYGDLVA
DMRAIPIMASTGFPVIMDATHAVQSPGGQGASSGGDRRFAPVLARAAVSLGLAGVFIETH
PDPDHAPSDGPNMIRLADMPALISSLMAFDRLAKADPLSIA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgacccatcatcacgtcgccgtcggtcgcactctggttctgggcaatgacctgcctttg
gttctgatcgccggcccgtgccagatggaaagccgcgaacacgcgctggaatgcgccggc
gcgctcaaggacatgtgcgaaaaggccggtatcggcctgatctacaaatcgtccttcgac
aaggccaaccgcacctcgctgtcgggccggcgcggcctggggctggaggcggcgcttccg
gtcttcgccgagatccgcgaaagcctggggctgccggtgctgaccgacatccataacgaa
gagcaatgcatccccgtcgccaaggcggtggacgtgttgcaaatcccggcctttttgtgc
cgccaaaccgacctgctggtggccgccgggcgcaccggtgcggtcatcaacgtgaaaaag
ggccagttcctggcaccgtcgcagatggccaacgtcgccgccaaggtggaaagcaccggc
aattcccgcatcctgctgaccgagcgcggcgcctgcttcggctatggcgatctggtcgcc
gacatgcgggccattccgatcatggccagcaccggttttccggtgatcatggacgccacc
cacgcggtgcaaagcccgggcgggcagggggcttcctccggcggtgatcgtcgcttcgcc
cccgtcctggcgcgggccgccgtatccttggggctggccggcgttttcattgaaacccat
cccgatcccgaccatgcgccgtccgacggacccaacatgatccgtctggccgacatgccg
gcgctgatttcttccctgatggcctttgaccgtttggccaaggccgatccccttagcatc
gcctga
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