Magnetospirillum gryphiswaldense MSR-1: MSR1_16600
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Entry
MSR1_16600 CDS
T05662
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSR1_16600 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgry03019
]
MSR1_16600 (recQ)
03400 DNA repair and recombination proteins [BR:
mgry03400
]
MSR1_16600 (recQ)
Enzymes [BR:
mgry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSR1_16600 (recQ)
Messenger RNA biogenesis [BR:
mgry03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MSR1_16600 (recQ)
DNA repair and recombination proteins [BR:
mgry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MSR1_16600 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
AVM74152
LinkDB
All DBs
Position
1735302..1737158
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AA seq
618 aa
AA seq
DB search
MAGRQRLQCRPLPPAPLAMTASLASARACLSSVFGFDSFRPGQEDIITPILAGEDVLAIM
PTGAGKSLCYQLPAIIGDGLTVVVSPLIALMRDQVAQMTNYGVAAAAMNSANDSDESRRV
FDLIRRRELKLLYLAPERLARSETVDFLRRSGTARLAIDEAHCVSQWGHDFRPEYLALGE
FRRALGQVQTIAFTATADSATRADIAERLFDAPPRIFIGGFDRPNLMLAMQAKDSPRRQL
LGFLKERKGDSGIIYCSSRAGCEDLAQGLNDAGHRALVYHAGLDKSRRENNQDTFLREDG
IVMVATVAFGMGIDKPDVRFVAHADLPKSIEAYYQEIGRAGRDGLPAETLTLYGLGDVRL
RRQQIEDSQASDEQKRVERQKLNALLALCEAPRCRRQTLLSYFGETTQPCGHCDLCLNGA
QVRDGTVDAQKALSAIWRTGQRFGTEHLVNILIGQDNDNILRFGHDKLPTFGVGKDQSRD
QWRALFRQIYAGGLISQDLSEHGGWRITEQGGEVLRGRARIDVRTDTLKAKGKSKRDKPV
PAVLRNDIDHDLLAELKKLRRELATDQGIPAYAVFPDRTLIELAAERPTSLAEMRGIHGI
GEAKLERYGDLFLEVLLG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggccggacgtcaaaggctacaatgccgccccttgccccctgccccgttggccatgacc
gcttccctcgcctctgcccgcgcctgcctgtcctcggtcttcggcttcgattcgtttcga
ccgggacaagaggatatcatcacccccatcctggccggcgaggatgtattggccatcatg
ccaaccggggccggcaagtcgctgtgctaccaattgccggcgattatcggtgacggcctg
accgtggtggtgtcgccgctgatcgcgctgatgcgcgatcaggtggcgcaaatgaccaat
tacggcgtggcggcggcggcgatgaattccgccaacgattccgacgaaagccgccgggtc
ttcgacctgatccgccgccgcgagctgaaattgctgtacctcgcccccgaacggctggcc
cggtcggaaacggtggatttcctgcgccgcagcggcaccgcccggctggccatcgacgag
gcccattgcgtcagccagtggggccacgacttccgccccgaatatctggccttgggtgaa
ttccgccgcgcgctcggtcaggtgcagaccatcgccttcaccgccaccgccgattccgcc
acccgcgccgatatcgccgaacgcctgttcgacgcgccgccgcgcatcttcatcggcggc
ttcgaccgccccaatctgatgctggccatgcaggccaaggacagcccgcgccggcaattg
ctgggcttcctcaaagagcgcaagggcgacagcggcatcatctattgcagttcgcgcgcc
ggctgcgaggatctggcccagggtcttaacgatgccggccaccgcgccttggtctatcac
gctggattggacaagagccggcgcgagaacaaccaggacaccttcctgcgcgaggacggc
atcgtcatggtcgccacggtggcgttcggcatgggcatcgacaaacccgacgtgcgcttc
gtcgcccatgccgatctgcccaaatccatcgaagcctattatcaggaaatcggtcgcgcc
ggacgcgacggcttgccggcggaaaccctgaccctgtacggattgggcgatgtgcgcctg
cgccgccagcagatcgaggacagccaagcctcggacgaacaaaagcgggtggagcggcaa
aagctgaatgcgctgttggccttgtgcgaggcgcccagatgccgccgccagactttgctg
tcctatttcggcgagaccacccagccgtgcggccattgcgatttgtgcctcaacggcgcc
caggtgcgcgacggcacggttgacgcgcaaaaggcgctgtcggccatctggcgtaccggt
cagcgctttggcaccgagcatctggtcaacatcctgatcggccaggacaacgacaatatc
ctgcgcttcggccacgacaaattgcccaccttcggcgtcggcaaggaccaaagccgcgac
cagtggcgcgccttgttccggcaaatctatgccggcggcctgatcagccaggatctgtcg
gagcatggcggctggcgcatcaccgaacaaggcggcgaggtgttgcgcggtcgcgcccgt
atcgacgtgcgtaccgacacactgaaggccaagggcaagagcaagcgggacaagccggtg
ccagcagtgctgcgcaacgacatcgaccatgacctgctggccgaactgaagaaattgcgg
cgcgaactggccaccgaccagggcatcccggcctatgcggtgttccccgaccgcacgctg
atcgaactggccgccgagcgcccgacatcactggcggaaatgcgcggcatccacggcatc
ggcgaagccaagctggaacgctatggcgatctgttcctggaagtgctgctggggtag
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