Magnetospirillum gryphiswaldense MSR-1: MSR1_18110
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Entry
MSR1_18110 CDS
T05662
Symbol
aspS
Name
(GenBank) Aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MSR1_18110 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mgry01007
]
MSR1_18110 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mgry03016
]
MSR1_18110 (aspS)
03029 Mitochondrial biogenesis [BR:
mgry03029
]
MSR1_18110 (aspS)
Enzymes [BR:
mgry01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
MSR1_18110 (aspS)
Amino acid related enzymes [BR:
mgry01007
]
Aminoacyl-tRNA synthetase
Class II (A)
MSR1_18110 (aspS)
Transfer RNA biogenesis [BR:
mgry03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MSR1_18110 (aspS)
Prokaryotic type
Other AARSs
MSR1_18110 (aspS)
Mitochondrial biogenesis [BR:
mgry03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
MSR1_18110 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AVM74303
LinkDB
All DBs
Position
complement(1903929..1905716)
Genome browser
AA seq
595 aa
AA seq
DB search
MHQYRTHTCGQLRASDAGTIARLSGWVHRKRDHGNLLFVDLRDHYGLTQCVLDISSAVFA
TLEKARPESVITVTGKVVSRTSDTINPRLPTGEIELQVAEIEIQSIADVLPIQVAGDQEY
PEDMRLKYRFLDLRREDVHANMMLRSEVIAYLRKAMLDQGFTEFQTPILTASSPEGARDY
LVPARLHPGKFYALPQAPQQFKQLLMVAGFDKYFQIAPCFRDEAGRADRSPGEFYQLDFE
MSYVTQDDVFAAIEPVLEGVFKQFGKGRKVTPAPFPRIPYAESMLKYGSDKPDLRNPIEI
ADVTEPFRGSGFGLFAKLVDKGAVVRAIPAPGAANQPRSWFDKLNEWARENGAGGLGYIQ
FAADGAKGPIAKNLEPERINAIKEAAKLNDGDAVFFACDKELPAAKFAGLVRTKIGNDLD
LLEKDVFKFCWTVDFPMYELNEETGLIDFSHNPFSMPQGGMDALENQDPLTINAYQYDIV
CNGVELSSGAIRNHRADIMIKAFGIAGYGPEVVEEKFGGMLNAFRYGAPPHGGSAPGVDR
IVMLLADQPNIREVILFPMNQQAQDLLMGAPAEVDAMRWKELHIKPDLPKPKKEG
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaatatcgcacgcacacctgcggccagcttcgcgccagcgatgccggcaccatt
gcccgcctgtccggttgggtccaccgcaagcgtgaccatggcaaccttctgttcgtcgat
ttgcgcgaccattacggtctgacccagtgcgtcttggatatttccagcgccgttttcgcc
accttggaaaaggcccggccggaaagcgtcatcaccgtcaccggcaaggtggtcagccgc
accagcgacaccatcaatccgcgcctgcccaccggcgagatcgagttgcaggtggccgag
atcgagattcagtccatcgccgacgttctgcctatccaggtggccggtgaccaggaatat
cccgaggacatgcggctcaagtaccgcttcctcgatctgcgccgtgaagacgtgcacgcc
aacatgatgctgcgctcagaggtgatcgcctatttgcgcaaggccatgctggaccagggc
ttcaccgagttccagaccccgatcctcaccgcttccagcccggaaggcgcacgcgattat
ctggtccccgcccgtctgcatcccggcaagttctatgcgctgccgcaggcgccgcagcag
ttcaagcaattgctgatggtggctggcttcgacaagtatttccagatcgcgccgtgcttc
cgtgacgaggccggtcgtgccgaccgttccccgggcgagttctaccagctcgatttcgag
atgagctacgtgacgcaagacgacgtcttcgccgccatcgagccggtgctggaaggcgtg
ttcaagcagttcggcaagggccgcaaggtcaccccggcgccgttcccgcgcatcccttac
gctgaatccatgctgaaatacggctcggacaagcccgatctgcgtaaccccatcgagatc
gccgacgtcaccgagccgttccgcggctccggtttcggcctgttcgccaagctggtggac
aagggcgcggtggtccgtgccattcccgcccccggcgccgccaaccagccgcgctcgtgg
ttcgacaagctcaacgaatgggcgcgtgaaaacggtgccggcggtctgggctatatccaa
ttcgccgccgatggtgccaagggccccatcgccaagaacctggaaccggaacgcatcaac
gcgatcaaggaagcggccaagttgaacgacggcgatgccgtgttcttcgcctgcgacaag
gaattgccggcggccaagttcgcgggcctcgtccgcaccaagatcggcaacgatctggac
ctgttggaaaaggacgtgttcaagttctgctggaccgtggacttccccatgtacgagctg
aacgaggaaaccggcctgatcgatttcagccacaacccgttctccatgccccagggcggc
atggacgcgctggaaaaccaggacccgctgaccatcaacgcctatcagtacgacatcgtc
tgtaacggcgtcgaattgtcgtcgggcgccatccgcaaccaccgtgccgacatcatgatc
aaggccttcggcatcgccggctatggcccggaagtggtcgaggaaaagttcggcggcatg
ttgaacgccttccgttacggcgcgccgccgcacggtggttcggccccgggcgtcgatcgc
atcgtcatgttgctggctgatcagcccaacatccgcgaggtcatcttgttccccatgaac
cagcaggctcaggacctgctgatgggggcgccggctgaggtcgatgccatgcgctggaag
gaactgcacatcaagccggatctgcccaagccgaaaaaggaaggctga
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