Magnetospirillum gryphiswaldense MSR-1: MSR1_19980
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Entry
MSR1_19980 CDS
T05662
Name
(GenBank) Long-chain-fatty-acid--CoA ligase FadD15
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00061
Fatty acid biosynthesis
mgry00071
Fatty acid degradation
mgry01100
Metabolic pathways
mgry01212
Fatty acid metabolism
mgry02024
Quorum sensing
mgry04146
Peroxisome
Module
mgry_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MSR1_19980
00071 Fatty acid degradation
MSR1_19980
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MSR1_19980
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSR1_19980
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mgry01004
]
MSR1_19980
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mgry04147
]
MSR1_19980
Enzymes [BR:
mgry01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MSR1_19980
Lipid biosynthesis proteins [BR:
mgry01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MSR1_19980
Exosome [BR:
mgry04147
]
Exosomal proteins
Exosomal proteins of breast milk
MSR1_19980
Exosomal proteins of breast cancer cells
MSR1_19980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
SH3_2
CMAS
Motif
Other DBs
NCBI-ProteinID:
AVM74487
LinkDB
All DBs
Position
2088339..2090273
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AA seq
644 aa
AA seq
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MSHDYNDTAKFDTFPKLLCENARRWPNDVAMREKEFGIWNLFTWTDYLNEVRRLALGLAA
TGVKRGDVVAILGKNRPEWVWGELAAHSIGALSMGVYQDSMNAEVAYLLNYTAATVVLAE
DEEQVDKLLEIAPEVPSLRYIVYFDPRGMRKYQDDKLIFAGDLRAKGDELAAREPGRFEA
EVNEGKGDDVSVLVTTSGTTSNPKLAMLQSGPFLRHCTAYLRADEKSAGENYVSMLPLPW
IMEQIYAVGQPLVCRNIVNFVEEPETQMPDMREIGPHFVLLAPRTWEAIAAEVRSRMMDS
TRFKRFMFDLGMKLGMQALDQGKRSWLADRILFKALRDRIGFSYLKSAATGGAALGPDTF
RFFLAMGVPLRQIYGQTELAGAYTVHRGHDIDFDSVGIPFDDAQLRIDNPDHNGVGEIVA
HTDGMFTGYYKNPEASKADIVDGNWLKTGDAGYIKKENGHLVVIDRIKDLATTTHGVRFS
PQFIENKLKFSPFIAEAVILGAEKPYLSALVCIRYSIVSKWAEQKGIAFTNYTNLSAQEQ
VYELLRSEVEKVNATLPEPQRIRKFLLLYKELDADDGELTRTRKVRRGVINDKYGDIIDD
MYANRPMVPVDAVITFQDGSTTRVKTELKVITLLPPPTVAQAAE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgagccacgactataacgataccgccaagttcgatacctttcccaagctgctgtgcgaa
aacgcgcgccgctggcccaacgacgtggccatgcgggaaaaggaattcggcatctggaat
ctgttcacctggaccgattacctgaacgaagtccgccgcctcgccctgggcctggccgcc
accggggtcaagcgcggcgacgtggtcgccatcttgggcaagaaccggcccgaatgggtg
tggggcgaattggccgcgcattccatcggcgccctgtccatgggcgtctaccaggacagc
atgaacgccgaagtggcctatttgctcaattacaccgccgccaccgtggtgctggccgag
gacgaagagcaggtcgacaagcttttggaaatcgcccccgaggtgccgtccttacgctac
atcgtctatttcgacccgcgcggcatgcgcaagtaccaggacgacaagctgatcttcgct
ggcgatttgcgggccaagggcgacgaactggcggcgcgcgaaccgggccgcttcgaggcc
gaggtcaatgaaggcaagggcgatgacgtctcggtgctggtgaccacctcgggcaccacc
tcgaaccccaagctggccatgctgcaatcggggccgttcctgcgtcattgcaccgcctat
ttgcgcgccgatgaaaagagcgccggcgaaaattacgtctccatgctgccgctgccgtgg
atcatggagcagatttacgccgtcggtcagccgctggtctgccgcaacatcgtcaatttc
gtcgaggaaccggaaacccagatgcccgacatgcgggaaatcggcccgcatttcgtcctg
ctggcgccccggacctgggaagccatcgccgccgaggtccgctcgcgcatgatggattcg
acccgcttcaagcgtttcatgttcgacctgggcatgaagttgggcatgcaggcgctggat
cagggcaagcgctcgtggctggccgaccgcatcctgttcaaggcgctcagggaccgcatc
ggtttcagctatctgaagtcggcggccaccggcggcgccgcccttggtcccgataccttc
cgcttcttcctggccatgggcgtgccgctgcggcaaatctacggccagaccgaactggcc
ggcgcctatacggtgcaccgcggccacgacatcgacttcgacagcgtcggcattccgttt
gacgacgcgcaattgcgcatcgacaaccccgaccataacggcgtcggcgaaatcgtcgcc
cacaccgacggcatgttcaccggctattacaagaacccggaagcatcgaaggccgacatc
gtcgacggcaattggctgaagaccggcgatgccggctatatcaagaaggaaaacggccat
ctggtggtcatcgaccgcatcaaggatctggccaccaccacccatggcgtccgtttctcg
ccccagttcatcgagaacaagctgaaattctcgccgttcatcgccgaggcagtgatcctg
ggggcggaaaagccctatctgtcggcgttggtctgcatccgctattccatcgtgtcgaaa
tgggccgagcaaaagggcatcgctttcaccaactacaccaatctttcggcgcaagagcag
gtctatgaattgctgcgctcggaagtggagaaggtcaacgctaccctgcccgaaccccag
cgcatccgcaaattcctgctgctgtacaaggaactcgacgccgatgacggcgagctgacc
cgcacccgcaaggtccgccgcggcgtcatcaacgacaagtacggcgacatcatcgatgac
atgtacgcgaaccgcccgatggtgccggtggatgcggtcatcaccttccaggacggctcg
accaccagggtcaagaccgagctcaaggtgatcaccctgctgccgccccccaccgtcgcg
caagccgccgaatag
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