Magnetospirillum gryphiswaldense MSR-1: MSR1_22110
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Entry
MSR1_22110 CDS
T05662
Symbol
sdhB
Name
(GenBank) Succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00020
Citrate cycle (TCA cycle)
mgry00190
Oxidative phosphorylation
mgry00650
Butanoate metabolism
mgry00720
Other carbon fixation pathways
mgry01100
Metabolic pathways
mgry01110
Biosynthesis of secondary metabolites
mgry01120
Microbial metabolism in diverse environments
mgry01200
Carbon metabolism
Module
mgry_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mgry_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mgry_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MSR1_22110 (sdhB)
00650 Butanoate metabolism
MSR1_22110 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
MSR1_22110 (sdhB)
00720 Other carbon fixation pathways
MSR1_22110 (sdhB)
Enzymes [BR:
mgry01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
MSR1_22110 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer2
Fer4_9
Motif
Other DBs
NCBI-ProteinID:
AVM74696
UniProt:
V6F1M4
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All DBs
Position
complement(2361544..2362326)
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AA seq
260 aa
AA seq
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MVEFALPANSRVQNGKTHKAPAGAKKVKAFKIYRYDPDSGANPRLDTYEIDLDACGPMVL
DALLKIKNEIDSTLTFRRSCREGICGSCAMNIDGANTLACLKPIEDIKGDAKIYPLPHMP
VIKDLIPDLTVPYAQLASIKPWMQTQTPPPPDGERLQSPEEREKLDGMWECILCFCCQTS
CPSYWWNGDRYLGPAVLLQAARWIHDSRDEMTGERLDALEDPFKLYRCHTIMNCTKTCPK
GLNPAKAIGSIKTKLLQRGV
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaattcgccctgcccgccaattcccgggtacagaacggcaagacccacaaggct
cctgccggtgccaagaaggttaaggcgttcaagatttaccgctacgatcccgattcgggt
gccaacccgcgtctggacacctacgagatcgatctcgacgcctgcggccccatggttctg
gacgccctgctgaagatcaagaacgagatcgactcgacgctgaccttccgccgctcctgc
cgtgaaggcatctgcggttcctgcgccatgaacatcgacggcgccaacaccttggcctgc
ctgaagcccatcgaggacatcaagggcgacgccaagatctatccgctgccgcatatgccg
gtgatcaaggatctgatccctgacctgaccgtgccctatgcccagctggcgtcgatcaag
ccgtggatgcagacccagaccccgccgccgcccgatggcgaacggctgcaatcaccggaa
gagcgggaaaagctcgacggcatgtgggaatgcatcctgtgcttctgctgccagaccagc
tgccccagctactggtggaacggtgatcgttatctcggcccggcagtgctgttgcaggct
gcccgctggatccacgattcccgcgatgaaatgaccggtgaacgcctcgatgcgctggaa
gaccccttcaagctgtatcgctgccacaccatcatgaactgcaccaagacctgccccaag
gggctgaacccggccaaggccatcggttcgatcaagaccaagctgttgcagcgcggcgtc
tga
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