Magnetospirillum gryphiswaldense MSR-1: MSR1_25360
Help
Entry
MSR1_25360 CDS
T05662
Name
(GenBank) PD-(D/E)XK nuclease superfamily protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgry03400
]
MSR1_25360
Enzymes [BR:
mgry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSR1_25360
DNA repair and recombination proteins [BR:
mgry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MSR1_25360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AVM75017
LinkDB
All DBs
Position
2692606..2695557
Genome browser
AA seq
983 aa
AA seq
DB search
MSDAAAGSVFTIAPGLPFVDVLAGHLLRQAGGDPLRLAECVVLLPNRRACRALRDAFLRL
SGGQPLLLPRLKPIEPDQDDISDLDLLTPGGLDIPAAVPPIERHLILTRLVLQMGAGRGG
LPPSPDQAARLARELGELLDSVHIEEVPFDRLDTLAPDEYAAHWQITIDFLKIVTTHWPA
LLGGRIDHQQWVNRVLDAQGALWRADPPDHPVVAAGSTGSRPASARLLATIAALPHGQVV
LPGLDLHMDAQSWEALDDSHPQFAHKHLLERLGLTRRQVLPLTPQPDPRAARSALLAEAL
RPAATCEAWRHLRDFPNALDGVALIDAPGPREEAGAIALALRQALETDTQTAALVTPDRD
LARRVAAELERWDIAIDDSAGRPLMLTEPGAFLRLLAEAVADGFPPHATLALCKHPLAAA
GLDPIRFRALTRRLETKEILRGPRPAPGLGGLRAACAGDARLIGWLDALESALAPFITLM
AAESAPLADLLRAHMEAAEALAADHANPGPARLWRGEAGEALARFAGDLAEALATIGAMF
TPLPPRFYPALFDELLSGRVVRPHWGRHPRLFIWGPMEARLQHADVMILAGLNEGTWPGK
AEADPWMSRPMRKAFGLPAPERRIGQSAHDFAQAFAAPRVLLSRSSRSEGAPTVPSRWLM
RLDAVMGARGLAFANPQWEWLAWHALLDRAETRARIERPAPRPPIEARPRTVSVTEVETW
MRDPYGLYAKKVLKLKALPEIDADPGAADYGSLVHEAVEQFLLAYPQSLPDDAEAKLLAV
GEAVFAQALERPGVWAFWWPRFRAVARWLAAHEKKRRPELAAIHTEIKGALEMEGPAGPF
LLHARADRVDVLKDGTLALIDYKTGQPPSPKEVAAGYAPQLPLEAAIARFGGFDGIAPAA
VSQMLYWRLKGGAEGGEEKSAGADPKQLTDDALEGLYGLIAAFDDANTPYEARPHPDRAP
KYSDYLHLARVKEWAVAGEEEGE
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcggcagccggttcggtcttcaccatcgcccccggcctgcccttcgtcgat
gtgctggccggccacctgctgcgtcaggccggcggcgacccgctgcgtctggccgaatgc
gtggtgctgctgcccaaccgccgcgcctgccgggccttgcgcgacgcctttctgcgcctg
tcgggcggccaacccttgctgctgccgcgccttaaacccatcgagcccgaccaggacgac
atttccgacctcgatctgctgactcccggcggcctggacatcccggcggcggtgccgccc
atcgagcgccacctgatcctgacccggctggtattgcagatgggggcgggacgcggcggc
ctgccgcccagccccgatcaggcggcacggctggcgcgcgaattgggcgagctgctggac
agcgtccatatcgaggaagtgcccttcgaccgcctcgacaccctggcccccgacgaatac
gccgcccattggcagatcaccatcgactttctgaagatcgtcaccactcattggccggcg
ctgctgggcgggcgcatcgatcaccagcaatgggtcaatcgggtgctcgacgcccaaggg
gcgttgtggcgcgccgatccgcccgatcatccggtggtggcggcggggtccaccgggtcg
cgcccggccagcgcccgcttgctcgccaccatcgctgccctgccccacggtcaggtggtg
ctgcccggcctggatttgcacatggatgcgcaatcgtgggaggccttggacgacagccac
ccgcaattcgcccacaagcacttgctggaacgcctggggctgacccgccgtcaggtcttg
ccgctgacgccccagcccgacccgcgcgccgcccgttctgccctgctggccgaggcgctc
cgccccgccgccacctgcgaggcatggcggcatctgcgcgacttccccaacgccctggac
ggcgtcgccctgatcgatgccccagggccgcgcgaggaagccggggccatcgccctggcc
ctgcgtcaggcgctggagaccgacacccagaccgccgccctggtcacccccgaccgcgac
ctcgcccgccgcgtcgccgccgagttggaacgctgggacatcgccatcgacgattccgcc
ggcaggccgttgatgctgaccgagcccggcgccttcctgcggctgctggccgaggcggtg
gccgatggcttccccccccatgccaccttggccttgtgcaagcatccattggccgccgcc
gggctggaccccatccgtttccgcgccctgacccggcggctggaaaccaaggaaatcctg
cgcggtccccgtcccgcccccggcctgggcggcctgcgcgccgcctgcgctggcgatgcc
cggctgatcggctggctggatgcgctggaaagcgccctggccccattcatcaccctgatg
gccgccgaatccgcgcccttggccgatctgctgcgcgcccatatggaagcggccgaggcg
ctggccgccgaccacgccaatcccggcccggcccggctgtggcggggtgaggcgggcgag
gccctggcccgcttcgccggcgatctggccgaggcgctggccaccatcggcgccatgttc
accccgctgccgccacgcttctacccggccttgttcgatgaattgctgtcgggccgggtg
gtccgcccccattggggccgccatccccgcctgttcatctggggaccgatggaagcgcgg
ctgcaacacgccgatgtgatgatcctggccggtctcaacgagggtacctggccgggcaag
gccgaggccgatccgtggatgagccggcccatgcgcaaggccttcggcctgccggcgccc
gagcggcgcatcggccagtcggcccacgatttcgcccaggccttcgccgcgccgcgcgtg
ctgctgtcgcgttcgtcgcggtccgagggcgcccccaccgtgccgtcacgctggctgatg
cggctggatgcggtgatgggggcacgcggcttggcctttgccaatccgcaatgggaatgg
ctggcttggcacgccttgctcgaccgcgccgaaacccgcgcccgcatcgaacgcccggcg
cccaggccgcccatcgaggcgaggccgcgcaccgtctcggtcaccgaggtggagacctgg
atgcgcgacccctatggcctttacgccaagaaggtgctgaagctgaaggcactgccggag
atcgatgccgatcccggcgccgctgattacgggtcgttggtacatgaagcggtcgagcaa
ttcctgctcgcttatccccagtccctgcccgatgacgccgaggccaagctgttggcggtg
ggcgaagccgtgttcgcccaggcgttggaacggcccggcgtgtgggcgttctggtggccg
cgctttcgcgccgtcgcccgctggctggcggcgcatgaaaaaaagcgccgccccgaattg
gcggccatccacaccgagatcaagggggccttggagatggaaggccccgccggtcccttc
ctgctgcacgcccgcgccgaccgggtggatgtgctgaaggacggcaccctggccctgatc
gattacaagaccggccagccgcccagccccaaggaagtggccgccggctatgcgccgcaa
ttaccgctggaagcggccatcgcccgcttcggcggcttcgacggcattgctccggctgcg
gtgtcgcagatgctgtactggcggttgaagggcggggctgaaggcggcgaggagaaatca
gccggcgccgaccccaagcaactgaccgacgacgcgctggaaggcctctacggcctgatc
gccgccttcgacgatgccaacaccccctatgaggcccgcccccatcccgaccgcgcgccc
aaatattccgattacctgcatctggcccgggtcaaggaatgggcagtggccggggaagag
gagggggaatga
DBGET
integrated database retrieval system
