Magnetospirillum gryphiswaldense MSR-1: MSR1_25380
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Entry
MSR1_25380 CDS
T05662
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgry03400
]
MSR1_25380 (addA)
Enzymes [BR:
mgry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSR1_25380 (addA)
DNA repair and recombination proteins [BR:
mgry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MSR1_25380 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
UNC45-central
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
AVM75019
LinkDB
All DBs
Position
2696107..2699547
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AA seq
1146 aa
AA seq
DB search
MIVEASNRQRQAADPTASVWVAASAGTGKTKVLTDRVLNLLLAGNAPHKLLCLTFTKAAA
AEMSNRINAKLATWAVADDASLDQTLTELLGRPPTPPETIRARRLFAQVLDAPGGMHMET
IHAFCQSLLRRFPLEAGIAPHFQVMDDRDAGELLDEAKEEVLTHARHGADAHLAAALDQV
TRHVHETGFPDLLAELASDRGRLKRLLEREGGIDGAIQAMRTRLGLESGDTAETILAAAC
TDEACNAATLRQAVPILLNGAKTDQEKGTRLAAWLAAPETRAQAFAEYCLSVLTAKGEMR
AKLVTNGLRDAHPWLEPALQAEAERLIRVNARLKAAQVAQCTAALTRLGHALLAAYEKRK
QGRALMDYDDLILAARDLMARPGVAPWVLFKLDGGIDHVLIDEAQDTNPDQWAVVAALTG
EFFAGLGARESLRTVFAVGDIKQSIYSFQRADPQAFDDMRKLFAHHVPLAKREWREVPLN
LSFRSTRAVLDAVDAVFAGDGPGRDGVTDDDPDPRHLAFRQGQAGLVELWPPVIPRPADE
IPAWKPPIERLRGDSPRTRLARLMAARIAAMIGAEILESQNRPIRAGDVLVLLRRRGGFV
EDLVRELKDLKIPVAGADRMVLTEQMAVMDLMALGNFLLLPEDDLTLATVLKGPLVGLSE
DELFRLAWNRGEASLWDTLKRKAGSEAAFARAEDYLSPLLALADRLAPFALFAHVLGKLG
GKRALLARLGPEAEDPLDEFMALTMAFERGHPPSLQGFLRWLESGGTEIKRDLEQGGRDA
VRIMTVHGSKGLQAPIVFMPDTLQMPIQGPRLLWNGGPEDEILLWPPRAEMADDICEAAR
AAQKLAREREYRRLLYVAMTRAEDRLYVCGWETLRAAPQGCWYNLIRTSLEPLAARMEDP
FLAAAGETDDATVLRLTCRQEHAVEAQTFAEAEALLPALPAWARLTAPPEPAPPRPLAPS
QPEGEEPPARSPLSSDGAGRFKRGKLVHKLLQILPDLPRDRRAQAAIRFLKGTGGLDTSA
ALAIANEVSDILDHAGFAPLFAPGSKAEVPIVGLIGESRALSGQVDRLVVTATEVLVADY
KTNRRPPAVSEAIPDLYVRQMAAYRLALACIYPHHRIRCALVWTDGPALREIEPAALDDA
LDSMVG
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgaagccagcaatcgccagcgtcaggccgccgatcccaccgcttcggtgtgg
gtggcggcgtcggcgggcaccggcaagaccaaggtgctgaccgaccgcgtgctcaacctg
ctgctggccggcaatgcgccgcataaattgctgtgcctgaccttcaccaaggccgccgcc
gccgagatgagcaaccgcatcaacgccaagctggccacctgggcggtggccgacgatgcc
agcttggaccagaccttgaccgaattgctgggccgcccgcccaccccgcccgaaaccatc
cgggcgcgccgtctgttcgcccaggtgctggatgcgcccggcggcatgcatatggaaacc
atccatgccttctgccagtcgctgttgcgccgctttccgctggaagccggcatcgcgccg
cacttccaggtcatggacgaccgcgatgccggcgaattgctggacgaagccaaggaagag
gtgctgacccacgcccgccatggcgccgatgcgcatctggccgccgccctcgatcaggtc
acccgccatgtgcacgaaaccggctttcccgatctgttggccgaattggccagcgaccgg
ggccggctgaaacgcctgcttgaacgcgagggcggcatcgacggcgccatccaggccatg
cgcacccgtctgggcttggaatccggcgataccgccgaaaccatcctggccgccgcctgc
accgatgaagcctgcaatgccgccaccttgcgtcaggcggtgcccatcttgctgaatggc
gccaagaccgaccaggagaaaggcacacggctggccgcctggctggcggcgcccgagacc
cgggcccaagccttcgccgagtattgcctgagcgtgctgaccgccaagggcgagatgcgg
gccaagctggtgaccaatggcttgcgcgacgcccatccctggctggaaccggccttacag
gccgaggccgaacggctgatccgcgtcaatgcccggctgaaagcagcccaggtggcccaa
tgcaccgctgccctgacccgcttgggccatgccctgctggccgcctatgaaaagcgcaag
cagggccgcgccctgatggattacgacgatctgatcctggcggcgcgcgacctgatggcc
cggcccggcgtggcgccttgggtgctgttcaagctcgacggcggcatcgaccatgtgctg
atcgacgaggcccaggacaccaaccccgatcaatgggcggtggtggcggccttgaccggc
gagttcttcgccggcctgggcgcgcgtgaaagtttacgcacggtgttcgcggtgggcgac
atcaagcaaagcatctattcgttccagcgcgccgacccccaggccttcgacgacatgcgc
aagctgttcgcccaccatgtgcccctggccaagcgggaatggcgcgaagtgccgctgaac
ctgtcgttcaggtccacccgcgccgtgctcgacgcggtggatgcggtgttcgccggtgat
gggccgggccgcgacggcgtcaccgatgacgatcccgacccgcgccatctggcctttcgc
cagggccaagccggtctggtggaactctggccgccggtcatcccccgtcccgccgacgaa
atcccggcatggaaaccacccatcgagcgcctgcgcggcgattcgccccgcacccgattg
gcccggctgatggccgcgcgcatcgccgccatgatcggagcggaaatcctggaaagccag
aaccgcccgatccgcgccggcgacgtgctggtgctgctgcgccggcgcggcggcttcgtc
gaggatctggtacgcgaactcaaggacttgaagataccggtggccggtgccgaccgcatg
gtgctgaccgagcagatggcggtgatggatctgatggcgctgggcaatttcctgctgctg
cccgaggacgatctgaccctggccaccgtgctgaaaggcccgctggtcggcttgagcgag
gacgaattgttccgcctggcctggaaccggggcgaggccagcctgtgggacaccttgaag
cgcaaggccggcagcgaagccgcttttgcccgggccgaggattatttgtcgccgcttctg
gccctggccgaccgtctggccccctttgccctgttcgcccatgtgctgggtaaattgggc
ggcaagcgggcgctgctggcccgattgggaccggaagcggaagacccgttagatgagttc
atggcgctcaccatggcgtttgaacgcggccacccgccgtcgttgcaaggcttcctgcgc
tggctggaaagcggcggcaccgagatcaagcgcgacctggaacaaggcgggcgcgacgcc
gtccgcatcatgaccgtgcatggctcgaaaggcttgcaggcgcccatcgtcttcatgccc
gacaccttgcagatgccgattcaaggcccgcgcctgttgtggaacggcgggcccgaggat
gaaatcctgctgtggccgccccgggccgagatggccgacgacatctgtgaagctgcccgt
gccgcccagaaactggcgcgtgagcgtgaataccgccgcctgctttatgtggccatgacc
cgggccgaggaccggctttatgtctgcggctgggagaccctgcgggcggcgccccagggc
tgctggtacaatttgatccgcaccagcctggaaccgctggccgcccgcatggaagacccg
ttcctggcggcagccggtgagaccgacgacgccaccgtcttgcgcctgacctgccggcag
gaacacgcggtcgaggcccagaccttcgccgaagccgaagccctgctgcccgccttgccg
gcctgggcccgcctgacagcgccgccggaaccggcaccgccgcgcccgctggccccgtcg
cagcccgagggcgaggaaccgccggcccgctcgccgttgtccagcgacggagcgggccgc
ttcaagcgcggcaagctggtgcacaaattgctgcaaatcctgcccgatttgccccgcgac
cgccgagcccaggcggccatccgcttcttgaagggcaccggcgggctggacaccagtgca
gcgctggccatcgccaacgaagtcagcgacatcctcgaccatgctggtttcgccccgttg
ttcgcccccggctcgaaagccgaggtgcccatcgtcggcctgatcggcgaaagccgcgcc
ctgtccgggcaggtggaccggctggtggtcaccgcaaccgaagtgctggtggccgattac
aagaccaaccgccgcccgcccgccgtcagcgaagccatccccgacctttatgtgcggcag
atggccgcctatcgtctggccctggcctgcatctatccgcaccaccgcatccgctgcgcc
ctggtgtggaccgatggcccggctttgcgggaaatcgagcccgccgccctggacgatgcc
ctggacagcatggtgggttga
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