Magnetospirillum gryphiswaldense MSR-1: MSR1_26210
Help
Entry
MSR1_26210 CDS
T05662
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K19789
DNA repair protein RadD
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgry03400
]
MSR1_26210
DNA repair and recombination proteins [BR:
mgry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
MSR1_26210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
UPF0547
SWI2_SNF2
Zn_Ribbon_1
AAA_30
DZR
SLFN-g3_helicase
Zn_ribbon_3
Cas12f1-like_TNB
Lipase_GDSL_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AVM75101
LinkDB
All DBs
Position
complement(2779696..2781369)
Genome browser
AA seq
557 aa
AA seq
DB search
MLLRPRQRLFVERSVRALGEHHNTLGVAPTGAGKTIMLSAVTGEMIGDSRAKACVLAHRD
ELTDQNRTKFARVNPAFTTSVVDAGAKSWQGQVTFAMVPTLARAANLDGMPALDLLVIDE
AHHAAADSYRRIIDRALTRNPHCRIFGVTATPNRGDGKGLRPVFSNVADQIRIGELIASG
HLVRPRTFVVDVGVQDALAGVRKTADDFDMIQVDAIMNRAPVTEAVITHWKEKAGNRQTV
VFCSTVRHAENVTAAFNDTGIPAVMVIGDMGEAERRAALAAYGRGEAQVVVNVAVLTEGW
DHPPTSCVVLLRPSSYKSTMIQMVGRGLRTICPDEHPGLVKTDCVVLDFGTSTLLHGSLE
QDVDLDGHEGCGEAPSKDCPECGASVPLGVSECPICGYVWQRGSEVIPINDFAMTEVDLL
QRSSFRWCDLFGDDAALVASGFNAWGGIFFLDGLWSAIGGLHRQQPRLLAVGERTICLAA
ADDWLNENETDESAHKSKRWLGQPPTDKQLALLPAECRQDFGLTRYQASALLAFRFNRQA
IRALVTQARDGSNRRAA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgtccccgccagcgtctgttcgtcgagcgcagcgtccgcgcgctcggcgag
caccataacaccctgggtgtcgcccccaccggggccggcaagacgatcatgctgtcggcg
gtgaccggcgaaatgatcggcgacagccgggccaaggcctgcgtgctggcccaccgtgac
gaactgaccgaccagaaccggaccaagttcgcccgcgtcaatccggcattcaccacctcg
gtggtggatgcgggagccaagtcgtggcagggccaggtcaccttcgccatggtgcccacc
ctggcgcgggcggccaatctggacggcatgccggcgctcgacctgctggtgatcgacgag
gcccaccatgctgccgccgacagctatcgccgcatcatcgaccgggcgctcacccgcaat
ccgcactgccgcatcttcggcgtcaccgccactcccaatcgcggcgacggcaaggggctg
cggccggtgttctccaatgtcgccgaccagatccgcatcggcgagctgatcgcctccggc
catctggtccgcccgcgcacctttgtggtcgatgtgggcgtccaggacgccctggccggg
gtgcgcaagaccgccgacgacttcgacatgatccaggttgacgccatcatgaaccgggca
ccggtgaccgaggcggtgatcacccactggaaggagaaggcgggcaaccggcagactgtg
gtgttctgctccactgtccgtcatgccgagaacgtcaccgcggcgttcaacgacaccggc
atcccggcggtgatggtgatcggcgacatgggcgaggccgagcgccgtgcggcgctggcc
gcctatggtcgcggcgaggcccaggtggtggtcaacgtcgcagtgctgaccgaaggctgg
gaccatccgcccacctcctgcgtggtgctgctgcggcccagttcctacaagtcgaccatg
atccagatggtcggccggggactgcgcaccatctgccccgacgagcatccgggcttggtc
aagaccgactgcgtcgtcctcgatttcggcacctccaccctgctgcacggctcgcttgaa
caggacgtcgatctcgacggtcacgagggatgcggcgaggccccgtccaaggattgcccg
gaatgcggggccagcgtgccgctcggcgtgtccgaatgcccgatctgcggctatgtctgg
cagcgcggcagcgaagtgatcccgatcaacgacttcgccatgaccgaggtcgatctgctg
caacgctccagcttccgctggtgcgacctgttcggtgacgacgcggcgctggtggccagc
ggcttcaacgcctggggcggcatcttcttcctcgacgggctgtggagcgccatcggcggc
ctgcaccgccagcagcctcgcctgctggcggtgggcgaacgcaccatctgcctggcggcg
gccgacgactggctcaacgagaacgagaccgacgaaagcgctcacaagagcaagcgctgg
ttgggccagccgcccaccgacaagcagttggccctgctgccggcggagtgtcggcaggat
ttcgggctgacccgctatcaggcctccgccctgctggcgtttcgcttcaaccgtcaggcc
atccgcgccctggtcacccaggcccgcgatggctccaaccggagggcggcgtga
DBGET
integrated database retrieval system